A0A1X0P1D4 · A0A1X0P1D4_9TRYP

Function

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Catalytic activity

GO annotations

AspectTerm
Cellular Componentnucleolus
Molecular FunctionATP binding
Molecular FunctionATP hydrolysis activity
Molecular Functionhelicase activity
Molecular FunctionRNA binding
Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    RNA helicase
  • EC number

Gene names

    • ORF names
      TM35_000071560

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • Edinburgh
  • Taxonomic lineage
    Eukaryota > Discoba > Euglenozoa > Kinetoplastea > Metakinetoplastina > Trypanosomatida > Trypanosomatidae > Trypanosoma

Accessions

  • Primary accession
    A0A1X0P1D4

Proteomes

Organism-specific databases

Subcellular Location

Interaction

Protein-protein interaction databases

Family & Domains

Features

Showing features for region, compositional bias, domain, coiled coil.

Type
IDPosition(s)Description
Region1-38Disordered
Compositional bias24-38Basic and acidic residues
Domain178-369Helicase ATP-binding
Region450-483Disordered
Domain478-662Helicase C-terminal
Compositional bias495-521Basic and acidic residues
Region495-526Disordered
Coiled coil812-839

Sequence similarities

Belongs to the DEAD box helicase family. DEAH subfamily.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    977
  • Mass (Da)
    111,280
  • Last updated
    2017-07-05 v1
  • Checksum
    77FEF928ABE45EE9
MAPKPSIRFEDLGLSTPLPHVLSTTREQKKKEKHEIKKERNARLREAEEQLSLAKKKVIQHKTFVETEAAIQKKEKAERKKAISEKQQCTRQERELQENIKKRESIIAQQNYITKLTEDRLAEEKRKQEIQEVINKNTEELVKLVPKNVCIQVNRSSDVENTRKELPVLREEQSIVEAINNSSRTCVLICGETGSGKTTQVPQFLWECGYGDIKGSSFAREGAILVTEPRRVAAVSMAKRVAEELNTSFGGKVCYHVRYDNNLSENFKLKFATEGIVLKEIQSDFLLRKYSVIIVDEAHERSVTGDILVGLLSRILPLRNDLYLEDLQKHQGKVENTTIKPLKLVIMSATMRVGDFKENRQLFPISPPLINVESRRFPVTNHFTKKTELRNYVDETFKKVCQIHKKLPPGGILVFLSTQQEIEDLCERLRIHYAKTKIEYYEKSYSKHSMVVQKQEEKDSSDSETEKEDKSDEKDEFGLTNEDYSLEKGDEIGDFSISRKRSRETSDMEENNNNNNNKEEEEENEINGELNTLHILPLYALMDFSKQQEVFREPPTGKRLCVIATNVAETSITIPNIRYVVDSGRVKTKTIDESTGASCFRIEWTSQASAEQRSGRAGRVGPGHCYRIYSTAVYSNLMPKHSSPEILRTSLESVVLLMKHLGIDNVGSFPFPSPPKENDLKRALSHLTLIGALDSKEERRITTLGRRLIAYPIPPRFSRVIAEVLDQKLPDSILLMVILITAVYSTTTNIFTGDGNRLKWKSKEVTTDDIDERRSLIHSLLHPGSDMLTCLNAFGIYLENSSTLNCNRYCLVQKSLSEARQLSQQLQSLARQNSVVEQVEDSLEANDVTTGSVGCLFTKNGKLTLSKEDEITLRKIFIYGLPDQVARRATIQECRYHGVEYKDNKATKAPYIILSSSMIAYIHPTSSIARTFPPPEFVTFAFLQRSVRSETKDPATMMLGLTIVIKEWLHECGVTVE

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias24-38Basic and acidic residues
Compositional bias495-521Basic and acidic residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
NBCO01000007
EMBL· GenBank· DDBJ
ORC90732.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.
Help