A0A1V0D7A1 · A0A1V0D7A1_DANRE

Function

GO annotations

AspectTerm
Cellular Componentmembrane
Cellular Componentplasma membrane
Cellular Componentstereocilium
Molecular Functioncalcium ion binding
Biological Processcell adhesion
Biological Processcilium assembly
Biological Processdetection of mechanical stimulus involved in sensory perception
Biological Processdetection of mechanical stimulus involved in sensory perception of sound
Biological Processendocytosis
Biological Processhair cell differentiation
Biological Processhomophilic cell adhesion via plasma membrane adhesion molecules
Biological Processinner ear development
Biological Processsensory organ development

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Protocadherin 15a CD3 isoform
    • Protocadherin-related 15a

Gene names

    • Name
      pcdh15a
    • Synonyms
      PCDH15
      , si:bac7cse.1
      , si:xx-bac7cse.1

Organism names

  • Taxonomic identifier
  • Strain
    • Tuebingen
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Ostariophysi > Cypriniformes > Danionidae > Danioninae > Danio

Accessions

  • Primary accession
    A0A1V0D7A1
  • Secondary accessions
    • A0A8M6Z940

Proteomes

Organism-specific databases

Subcellular Location

Features

Showing features for transmembrane.

TypeIDPosition(s)Description
Transmembrane1380-1402Helical

Keywords

  • Cellular component

PTM/Processing

Features

Showing features for signal, chain.

Type
IDPosition(s)Description
Signal1-26
ChainPRO_501070001527-1726

Family & Domains

Features

Showing features for domain, region, compositional bias.

Type
IDPosition(s)Description
Domain43-152Cadherin
Domain153-270Cadherin
Domain283-400Cadherin
Domain401-514Cadherin
Domain515-621Cadherin
Domain622-722Cadherin
Domain724-824Cadherin
Domain825-931Cadherin
Domain932-1040Cadherin
Domain1042-1149Cadherin
Domain1150-1264Cadherin
Region1556-1579Disordered
Compositional bias1562-1579Polar residues

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    1,726
  • Mass (Da)
    190,133
  • Last updated
    2017-06-07 v1
  • Checksum
    25142E36C90423DA
MRRRWWRLDCLGSAIALFVIISQISAQNTEDWHYEECKLSRSGPPATIVTIDEESPNGTILVENMQINGRARDPDRTISLTLLDNYDYWVILDPALQRLFLNSTGRVLDRDPPSSITTIVVQIQCTNELVGTVILHEVRIVVRDRNDNTPRFQQPRYYVSVNELTPVGTTIFTGFSGNNGATDIDDGPNGQIEYAIQYNPNDPMSNRTVRIAGTLSGNIVLAERLNYEERTRYLIIVQANDRAPYPGTRRTATTTLTLDVLDGDDLGPMFLPCVLVNNTQDCNPVTYRVAIPELTDPNKLNPLNVTPPIRAIDQDRNIQPPSDRPGILYFILVGTPSTYPEFFTLNRSTAELRLLKSVDRELYQRFSLVIKAEQDNGHPLPAYSKLEIEILDENNQAPYFQQSSYRGFVSESSSVGTTISASANLTAPLAIIALDNDIEETKDPQLKITLNEYTSIFTITTSGITRFLTLLKPVDREIQTNYTLTLVATDGVQQSRPVTVDILVIDANDNTPTFAQVSYSVEIFTNMLPGETVLQLMAQDADAGLNGLITYAILAGDHGDFIINNRTGRITLAPGVMLTVGRSYALTVRAADNAPDTERRSSITTVYIEVLPPNNQSPPRFPLQTYNLEISEAMRIGAILLNLQATDRELDPITYRIETGDPQEVFNLSRTIGLLLLAKPLDRETIDQYRLIVTASDGHPGGISTATVSIVITDVNDNDPTFDLTLPRNLTVREEEANVFVGQVRATDPDGGLNGQVRYRLLSFASLFSINSTGSIFTAVPLDRETRSRYDLIVEASDGAVDPRRTTITLLVEVLDINDNSPVFSQPVYTVNVPENTPAGSIILRLTAVDADLVSNVTYRIKTEAALQLFAVNRLTGVISVLQALDFESLAAGNSTYTFEVEALDHGGVLPPGTATVSVRITDMNDFSPVFRQALYKGLVAPNAEKGTVITTVLAEDQDPPGTPASKVRYRVDQELSPYSGSIFDVETDTGLVITKVNLNEQPTTVFKLVVMAYDDGEPVKTNRTTVEITVLQPSRIPIFTEEEYRFSPVSENAPIGTPVGLILAAATNTTVVYSIVSGNEGGVFTVNKSTGIIYTNKSLDYENVTSYVLRVQADSLTVILANLRAPSKTNTAKVFINVQDENDHPPVFSRQVYIGGVTEDTKTFTTVLKIVATDVDTGNYSKMAYRLIIPPTTEGQDSFVIEPYTGVIKSAIMFRNMRRSYFKFQVVATDDYGKGLTSKADVVVSVVNALDMQVVVSNVPPTVVEENKEQLISILERYVQDQIPGAKVIVESIGPRRHGEGYELEDYSKSDLQVYAIDPLTNRAISRQELFKFLDGKILDINKEFQPYLGEGGRILEIRSPDIVATVKKAAQAVGYTEGALLALAIIIILCCIPAILIVMVTYKQFKERQAECAKTARIQMALPAGKSTGGGGGGGGGGGGGGGAQTNLYEELGDGGIRRGMGRQQQLLRPSLLRPEALSMESGIDPGQDYYTQDYYGYDQGFDPYPPYGSRRRLITPMYDEYGEAFMEDEGYYYGGPEVDKKKRIKLILDREHDATSTGEDSGPDIQRNRIPNVSSHSNINGSVYLAQNGTIIRTRRPPYANNLKLGSPTRLGKQFKKLDKLGVTHEEHLPLNGTEDNGPTIGTTTAHSYMTDHNLNSKECSVKGPNCIGPKSNIDKARLEQESSVDNGEVKESVESPCEQTLSDEEELWMGPWNSLHIPMTKL

Computationally mapped potential isoform sequences

There are 8 potential isoforms mapped to this entry

View all
EntryEntry nameGene nameLength
A0A8M3B5H0A0A8M3B5H0_DANREpcdh15a1806
A0A8M6Z9I8A0A8M6Z9I8_DANREpcdh15a1714
Q5ICW6Q5ICW6_DANREpcdh15a1796
A0A8M6Z284A0A8M6Z284_DANREpcdh15a1726
A0A8M6Z1L7A0A8M6Z1L7_DANREpcdh15a1727
A0A8M6Z1M2A0A8M6Z1M2_DANREpcdh15a1713
A0A8M3AZF2A0A8M3AZF2_DANREpcdh15a1801
A0A8M6Z3R5A0A8M6Z3R5_DANREpcdh15a1725

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias1562-1579Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
BX005204
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.
BX324172
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.
BX548002
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.
CU075715
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.
CU467855
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.
CU467884
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.
CU856144
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.
KY432405
EMBL· GenBank· DDBJ
ARA90564.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

Disclaimer

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