A0A1V0D7A1 · A0A1V0D7A1_DANRE
- ProteinProtocadherin 15a CD3 isoform
- Genepcdh15a
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids1726 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score4/5
Function
GO annotations
Aspect | Term | |
---|---|---|
Cellular Component | membrane | |
Cellular Component | plasma membrane | |
Cellular Component | stereocilium | |
Molecular Function | calcium ion binding | |
Biological Process | cell adhesion | |
Biological Process | cilium assembly | |
Biological Process | detection of mechanical stimulus involved in sensory perception | |
Biological Process | detection of mechanical stimulus involved in sensory perception of sound | |
Biological Process | endocytosis | |
Biological Process | hair cell differentiation | |
Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | |
Biological Process | inner ear development | |
Biological Process | sensory organ development |
Keywords
- Biological process
- Ligand
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Ostariophysi > Cypriniformes > Danionidae > Danioninae > Danio
Accessions
- Primary accessionA0A1V0D7A1
- Secondary accessions
Proteomes
Organism-specific databases
Subcellular Location
UniProt Annotation
GO Annotation
Features
Showing features for transmembrane.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Transmembrane | 1380-1402 | Helical | |||
Keywords
- Cellular component
PTM/Processing
Features
Showing features for signal, chain.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Signal | 1-26 | ||||
Chain | PRO_5010700015 | 27-1726 | |||
Structure
Family & Domains
Features
Showing features for domain, region, compositional bias.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Domain | 43-152 | Cadherin | |||
Domain | 153-270 | Cadherin | |||
Domain | 283-400 | Cadherin | |||
Domain | 401-514 | Cadherin | |||
Domain | 515-621 | Cadherin | |||
Domain | 622-722 | Cadherin | |||
Domain | 724-824 | Cadherin | |||
Domain | 825-931 | Cadherin | |||
Domain | 932-1040 | Cadherin | |||
Domain | 1042-1149 | Cadherin | |||
Domain | 1150-1264 | Cadherin | |||
Region | 1556-1579 | Disordered | |||
Compositional bias | 1562-1579 | Polar residues | |||
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length1,726
- Mass (Da)190,133
- Last updated2017-06-07 v1
- Checksum25142E36C90423DA
Computationally mapped potential isoform sequences
There are 8 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
A0A8M3B5H0 | A0A8M3B5H0_DANRE | pcdh15a | 1806 | ||
A0A8M6Z9I8 | A0A8M6Z9I8_DANRE | pcdh15a | 1714 | ||
Q5ICW6 | Q5ICW6_DANRE | pcdh15a | 1796 | ||
A0A8M6Z284 | A0A8M6Z284_DANRE | pcdh15a | 1726 | ||
A0A8M6Z1L7 | A0A8M6Z1L7_DANRE | pcdh15a | 1727 | ||
A0A8M6Z1M2 | A0A8M6Z1M2_DANRE | pcdh15a | 1713 | ||
A0A8M3AZF2 | A0A8M3AZF2_DANRE | pcdh15a | 1801 | ||
A0A8M6Z3R5 | A0A8M6Z3R5_DANRE | pcdh15a | 1725 |
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Compositional bias | 1562-1579 | Polar residues | |||
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
BX005204 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
BX324172 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
BX548002 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
CU075715 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
CU467855 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
CU467884 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
CU856144 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
KY432405 EMBL· GenBank· DDBJ | ARA90564.1 EMBL· GenBank· DDBJ | mRNA |