A0A1S5WIV3 · A0A1S5WIV3_9VIRI

  • Protein
    Clathrin light chain
  • Gene
    CLC2a
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Evidence at transcript level
  • Annotation score
    2/5

Function

function

Clathrin is the major protein of the polyhedral coat of coated pits and vesicles.

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentclathrin coat of coated pit
Cellular Componentclathrin coat of trans-Golgi network vesicle
Molecular Functionclathrin heavy chain binding
Molecular Functionstructural molecule activity
Biological Processclathrin-dependent endocytosis
Biological Processintracellular protein transport

Names & Taxonomy

Protein names

  • Recommended name
    Clathrin light chain

Gene names

    • Name
      CLC2a

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • IF01
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Charophyceae > Charales > Characeae > Chara

Accessions

  • Primary accession
    A0A1S5WIV3

Subcellular Location

Cytoplasmic vesicle membrane
; Peripheral membrane protein
Membrane, coated pit
; Peripheral membrane protein
Note: Cytoplasmic face of coated pits and vesicles.

Keywords

Family & Domains

Features

Showing features for region, compositional bias, coiled coil.

TypeIDPosition(s)Description
Region1-50Disordered
Compositional bias7-42Polar residues
Coiled coil55-83
Compositional bias142-165Basic and acidic residues
Region142-194Disordered
Compositional bias168-182Polar residues

Sequence similarities

Belongs to the clathrin light chain family.

Keywords

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    272
  • Mass (Da)
    29,994
  • Last updated
    2017-05-10 v1
  • Checksum
    CFA7CC4CAEA17A0C
MSEEQVEDDASGSGSGNGDGKENMSPMGTGGTPTSARTLPRRESSTVLRETSELIHEWRRQRAKELQKKADMEKKKKADILQQASIQREAMVSERSKAIAAAYKTNREKEKVYLAELEWSMQTKPGGNYWATVAKIADDAKVGAEEKEKPARAGSVDRGKDKGRRGSGAASSPSTSTSAGSPAALPKPGDWQARPRRQEREMRLLVQYLLEHGSESVLGHTRNFFECISPLFAATCSQFSISVRIAFFLLWLLELQKIVDFPPLVHKNSGVV

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias7-42Polar residues
Compositional bias142-165Basic and acidic residues
Compositional bias168-182Polar residues

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
KX951956
EMBL· GenBank· DDBJ
AQQ11756.1
EMBL· GenBank· DDBJ
mRNA

Similar Proteins

Disclaimer

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