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A0A1R3JFV4 · A0A1R3JFV4_COCAP

  • Protein
    6-phosphogluconate dehydrogenase, decarboxylating
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    3/5

Function

function

Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO2, with concomitant reduction of NADP to NADPH.

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Catalytic activity

Pathway

Carbohydrate degradation; pentose phosphate pathway; D-ribulose 5-phosphate from D-glucose 6-phosphate (oxidative stage): step 3/3.

Features

Showing features for binding site, active site.

Type
IDPosition(s)Description
Binding site11-16NADP+ (UniProtKB | ChEBI)
Binding site34-36NADP+ (UniProtKB | ChEBI)
Binding site78-80NADP+ (UniProtKB | ChEBI)
Binding site106NADP+ (UniProtKB | ChEBI)
Binding site106substrate; ligand shared between dimeric partners; in other chain
Binding site132-134substrate; ligand shared between dimeric partners; in other chain
Active site186Proton acceptor
Binding site189-190substrate; ligand shared between dimeric partners; in other chain
Active site193Proton donor
Binding site194substrate; ligand shared between dimeric partners; in other chain
Binding site264substrate; ligand shared between dimeric partners; in other chain
Binding site291substrate; ligand shared between dimeric partners; in other chain
Binding site454substrate; ligand shared between dimeric partners
Binding site460substrate; ligand shared between dimeric partners

GO annotations

AspectTerm
Cellular Componentcytosol
Molecular FunctionNADP binding
Molecular Functionphosphogluconate dehydrogenase (decarboxylating) activity
Biological ProcessD-gluconate catabolic process
Biological Processpentose-phosphate shunt, oxidative branch

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    6-phosphogluconate dehydrogenase, decarboxylating
  • EC number

Gene names

    • ORF names
      CCACVL1_06395

Organism names

  • Taxonomic identifier
  • Strain
    • cv. CVL-1
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Malvales > Malvaceae > Grewioideae > Apeibeae > Corchorus

Accessions

  • Primary accession
    A0A1R3JFV4

Proteomes

Genome annotation databases

Subcellular Location

Interaction

Subunit

Homodimer.

Protein-protein interaction databases

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain182-4766-phosphogluconate dehydrogenase C-terminal

Sequence similarities

Belongs to the 6-phosphogluconate dehydrogenase family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    484
  • Mass (Da)
    53,546
  • Last updated
    2017-04-12 v1
  • MD5 Checksum
    C3BB72988EFC71B9D6357AEAF44032B7
MAALTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDPESFVQSIQKPRVIIMLVKAGAPVDQTIKTLSVYMEKGDCIIDGGNEWYENTERRERAMAELGLLYLGMGVSGGEEGARNGPSLMPGGSYEAYKYIEDILLKVAAQVDSGPCVTYVGKGGSGNFVKMVHNGIEYGDMQLIAEAYDVLKSVGKLSNEELHQVFSEWNKGELLSFLIEITADIFGIKDDKGEGYLVDKVLDKTGMKGTGKWTVQQAAELSIAAPTIASSLDARFLSGLKEERVEASKVFKSRGFDDVLADVAVDKKKLIDDVRQALYASKICSYAQGMNLIRAKSTEKEWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNPDLANLLVDPEFAKEIIERQSAWRRVVTLAISSGISTPGMSSSLAYFDSYRRERLPANLVQAQRDYFGAHTYERIDVSGSFHTEWFKIAKHSKI

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AWWV01008062
EMBL· GenBank· DDBJ
OMO93671.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
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