A0A1Q5RX15 · A0A1Q5RX15_9BRAD

Function

function

Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose.

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Catalytic activity

Pathway

Carbohydrate biosynthesis; dTDP-L-rhamnose biosynthesis.

Features

Showing features for active site, site.

Type
IDPosition(s)Description
Active site61Proton acceptor
Active site130Proton donor
Site136Participates in a stacking interaction with the thymidine ring of dTDP-4-oxo-6-deoxyglucose

GO annotations

AspectTerm
Cellular Componentcytosol
Molecular FunctiondTDP-4-dehydrorhamnose 3,5-epimerase activity
Biological ProcessdTDP-rhamnose biosynthetic process
Biological Processextracellular polysaccharide biosynthetic process

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    dTDP-4-dehydrorhamnose 3,5-epimerase
  • EC number
  • Alternative names
    • Thymidine diphospho-4-keto-rhamnose 3,5-epimerase

Gene names

    • ORF names
      AC628_09215

Organism names

  • Taxonomic identifier
  • Strain
    • NAS96.2
  • Taxonomic lineage
    Bacteria > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales > Nitrobacteraceae > Bradyrhizobium

Accessions

  • Primary accession
    A0A1Q5RX15

Proteomes

Subcellular Location

Interaction

Subunit

Homodimer.

Family & Domains

Sequence similarities

Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    184
  • Mass (Da)
    20,643
  • Last updated
    2017-04-12 v1
  • MD5 Checksum
    6A1012EB63FA2C9CD04709702BDAF61E
MNVIKTELPEVLIVEPKLFGDQRGFFLETYQAPRYVEHGIARPFVQDNMSRSAYGVLRGLHLQNPITQGKLVTVLRGKVLDVAVDVRVGSPNFGKHVAVELSEDNRRQLWVPRGFAHGFVVLSETADFFYKCDDFYSPKDELSIRWNDPAIGIKWGVDKPQLSAKDADAPLLADASNLPTYGQI

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
LGHK01000035
EMBL· GenBank· DDBJ
OKO80268.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
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