A0A1P8B8N5 · A0A1P8B8N5_ARATH
- ProteinNudix hydrolase
- GeneNUDT10
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids217 (go to sequence)
- Protein existenceInferred from homology
- Annotation score3/5
Variants
Variant ID(s) | Position(s) | Change | Description | Clinical significance | Provenance | ||
---|---|---|---|---|---|---|---|
tmp_4_13005080_G_T | 9 | A>D | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.5) Somatic: No Accession: 4:g.13005080G>T Codon: GCC/GAC Consequence type: missense Cytogenetic band: Genomic location: 4:g.13005080G>T Locations: - p.Ala9Asp (EnsemblPlants:AT4G25434.13) - c.26C>A (EnsemblPlants:AT4G25434.13) Source type: large scale study Cross-references: | |||||||
tmp_4_13005051_G_A | 19 | H>Y | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 4:g.13005051G>A Codon: CAT/TAT Consequence type: missense Cytogenetic band: Genomic location: 4:g.13005051G>A Locations: - p.His19Tyr (EnsemblPlants:AT4G25434.13) - c.55C>T (EnsemblPlants:AT4G25434.13) Source type: large scale study Cross-references: | |||||||
tmp_4_13004620_T_G | 86 | N>H | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.09) Somatic: No Accession: 4:g.13004620T>G Codon: AAT/CAT Consequence type: missense Cytogenetic band: Genomic location: 4:g.13004620T>G Locations: - p.Asn86His (EnsemblPlants:AT4G25434.13) - c.256A>C (EnsemblPlants:AT4G25434.13) Source type: large scale study Cross-references: | |||||||
ENSVATH02923025 | 96 | T>K | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.08) Somatic: No Accession: 4:g.13004589G>T Codon: ACG/AAG Consequence type: missense Cytogenetic band: Genomic location: 4:g.13004589G>T Locations: - p.Thr96Lys (EnsemblPlants:AT4G25434.13) - c.287C>A (EnsemblPlants:AT4G25434.13) Source type: large scale study Cross-references: | |||||||
tmp_4_13004571_A_T | 102 | L>H | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious - low confidence (0) Somatic: No Accession: 4:g.13004571A>T Codon: CTT/CAT Consequence type: missense Cytogenetic band: Genomic location: 4:g.13004571A>T Locations: - p.Leu102His (EnsemblPlants:AT4G25434.13) - c.305T>A (EnsemblPlants:AT4G25434.13) Source type: large scale study Cross-references: | |||||||
tmp_4_13004560_T_A | 106 | T>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.12) Somatic: No Accession: 4:g.13004560T>A Codon: ACT/TCT Consequence type: missense Cytogenetic band: Genomic location: 4:g.13004560T>A Locations: - p.Thr106Ser (EnsemblPlants:AT4G25434.13) - c.316A>T (EnsemblPlants:AT4G25434.13) Source type: large scale study Cross-references: | |||||||
ENSVATH12220356 | 117 | T>I | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.04) Somatic: No Accession: 4:g.13004434G>A Codon: CCC/TCC Consequence type: missense Cytogenetic band: Genomic location: 4:g.13004434G>A Locations: - p.Thr117Ile (EnsemblPlants:AT4G25434.13) - c.350C>T (EnsemblPlants:AT4G25434.13) Source type: large scale study Cross-references: | |||||||
tmp_4_13004421_A_C | 121 | F>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.11) Somatic: No Accession: 4:g.13004421A>C Codon: TTT/TGT Consequence type: missense Cytogenetic band: Genomic location: 4:g.13004421A>C Locations: - p.Phe121Leu (EnsemblPlants:AT4G25434.13) - c.363T>G (EnsemblPlants:AT4G25434.13) Source type: large scale study Cross-references: | |||||||
tmp_4_13004402_A_T | 128 | F>I | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 4:g.13004402A>T Codon: TAT/TAA Consequence type: missense Cytogenetic band: Genomic location: 4:g.13004402A>T Locations: - p.Phe128Ile (EnsemblPlants:AT4G25434.13) - c.382T>A (EnsemblPlants:AT4G25434.13) Source type: large scale study Cross-references: | |||||||
ENSVATH14295110 | 158 | S>F | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.59) Somatic: No Accession: 4:g.13004224G>A Codon: TCT/TTT Consequence type: missense Cytogenetic band: Genomic location: 4:g.13004224G>A Locations: - p.Ser158Phe (EnsemblPlants:AT4G25434.13) - c.473C>T (EnsemblPlants:AT4G25434.13) Source type: large scale study Cross-references: | |||||||
ENSVATH06773224 | 173 | I>F | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.02) Somatic: No Accession: 4:g.13004180T>A Codon: ATT/TTT Consequence type: missense Cytogenetic band: Genomic location: 4:g.13004180T>A Locations: - p.Ile173Phe (EnsemblPlants:AT4G25434.13) - c.517A>T (EnsemblPlants:AT4G25434.13) Source type: large scale study Cross-references: | |||||||
tmp_4_13004154_C_T | 181 | M>I | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.38) Somatic: No Accession: 4:g.13004154C>T Codon: ATG/ATA Consequence type: missense Cytogenetic band: Genomic location: 4:g.13004154C>T Locations: - p.Met181Ile (EnsemblPlants:AT4G25434.13) - c.543G>A (EnsemblPlants:AT4G25434.13) Source type: large scale study Cross-references: | |||||||
tmp_4_13004140_C_T | 186 | S>N | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.38) Somatic: No Accession: 4:g.13004140C>T Codon: AGT/AAT Consequence type: missense Cytogenetic band: Genomic location: 4:g.13004140C>T Locations: - p.Ser186Asn (EnsemblPlants:AT4G25434.13) - c.557G>A (EnsemblPlants:AT4G25434.13) Source type: large scale study Cross-references: | |||||||
ENSVATH06773223 | 191 | K>E | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.28) Somatic: No Accession: 4:g.13004126T>C Codon: AAA/GAA Consequence type: missense Cytogenetic band: Genomic location: 4:g.13004126T>C Locations: - p.Lys191Glu (EnsemblPlants:AT4G25434.13) - c.571A>G (EnsemblPlants:AT4G25434.13) Source type: large scale study Cross-references: | |||||||
tmp_4_13004102_C_A | 199 | D>Y | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.02) Somatic: No Accession: 4:g.13004102C>A Codon: GAC/TAC Consequence type: missense Cytogenetic band: Genomic location: 4:g.13004102C>A Locations: - p.Asp199Tyr (EnsemblPlants:AT4G25434.13) - c.595G>T (EnsemblPlants:AT4G25434.13) Source type: large scale study Cross-references: | |||||||
ENSVATH06773222 | 209 | Q>* | 1000Genomes | ||||
Consequence: stop gained Somatic: No Accession: 4:g.13004072G>A Codon: CAA/TAA Consequence type: stop gained Cytogenetic band: Genomic location: 4:g.13004072G>A Locations: - p.Gln209Ter (EnsemblPlants:AT4G25434.13) - c.625C>T (EnsemblPlants:AT4G25434.13) Source type: large scale study Cross-references: | |||||||
ENSVATH02923022 | 214 | Q>K | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.59) Somatic: No Accession: 4:g.13004057G>T Codon: CAA/AAA Consequence type: missense Cytogenetic band: Genomic location: 4:g.13004057G>T Locations: - p.Gln214Lys (EnsemblPlants:AT4G25434.13) - c.640C>A (EnsemblPlants:AT4G25434.13) Source type: large scale study Cross-references: | |||||||
ENSVATH00537550 | 216 | I>N | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious - low confidence (0.01) Somatic: No Accession: 4:g.13004050A>T Codon: ATT/AAT Consequence type: missense Cytogenetic band: Genomic location: 4:g.13004050A>T Locations: - p.Ile216Asn (EnsemblPlants:AT4G25434.13) - c.647T>A (EnsemblPlants:AT4G25434.13) Source type: large scale study Cross-references: | |||||||
ENSVATH00537550 | 216 | I>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.19) Somatic: No Accession: 4:g.13004050A>C Codon: ATT/AGT Consequence type: missense Cytogenetic band: Genomic location: 4:g.13004050A>C Locations: - p.Ile216Ser (EnsemblPlants:AT4G25434.13) - c.647T>G (EnsemblPlants:AT4G25434.13) Source type: large scale study Cross-references: |