A0A1L5YCG6 · A0A1L5YCG6_9EUKA
- ProteinCytochrome b6
- GenepetB
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids218 (go to sequence)
- Protein existenceInferred from homology
- Annotation score3/5
Function
function
Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
Miscellaneous
Heme 1 (or BH or b566) is high-potential and absorbs at about 566 nm, and heme 2 (or BL or b562) is low-potential and absorbs at about 562 nm.
Cofactor
Protein has several cofactor binding sites:
Note: Binds 2 heme b groups non-covalently with two histidine residues as axial ligands.
Note: Binds one heme group covalently by a single cysteine link with no axial amino acid ligand. This heme was named heme ci.
Features
Showing features for binding site.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Binding site | 38 | heme c (UniProtKB | ChEBI); covalent | |||
Binding site | 89 | Fe (UniProtKB | ChEBI) of heme b 2 (UniProtKB | ChEBI); axial binding residue | |||
Binding site | 103 | Fe (UniProtKB | ChEBI) of heme b 1 (UniProtKB | ChEBI); axial binding residue | |||
Binding site | 190 | Fe (UniProtKB | ChEBI) of heme b 2 (UniProtKB | ChEBI); axial binding residue | |||
Binding site | 205 | Fe (UniProtKB | ChEBI) of heme b 1 (UniProtKB | ChEBI); axial binding residue | |||
GO annotations
Aspect | Term | |
---|---|---|
Cellular Component | plastid | |
Cellular Component | thylakoid membrane | |
Molecular Function | electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | |
Molecular Function | metal ion binding | |
Molecular Function | oxidoreductase activity | |
Biological Process | photosynthesis | |
Biological Process | respiratory electron transport chain |
Keywords
- Biological process
- Ligand
Names & Taxonomy
Protein names
- Recommended nameCytochrome b6
Gene names
Encoded on
- Plastid
Organism names
- Organism
- Strains
- Taxonomic lineageEukaryota > Sar > Rhizaria > Cercozoa > Imbricatea > Silicofilosea > Euglyphida > Paulinellidae > Paulinella
Accessions
- Primary accessionA0A1L5YCG6
Proteomes
Subcellular Location
UniProt Annotation
GO Annotation
Cellular thylakoid membrane ; Multi-pass membrane protein
Membrane ; Multi-pass membrane protein
Features
Showing features for transmembrane.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Transmembrane | 35-61 | Helical | |||
Transmembrane | 91-109 | Helical | |||
Transmembrane | 121-141 | Helical | |||
Transmembrane | 147-165 | Helical | |||
Transmembrane | 186-209 | Helical | |||
Keywords
- Cellular component
Interaction
Subunit
The 4 large subunits of the cytochrome b6-f complex are cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are PetG, PetL, PetM and PetN. The complex functions as a dimer.
Structure
Family & Domains
Sequence
- Sequence statusComplete
- Length218
- Mass (Da)24,643
- Last updated2017-03-15 v1
- MD5 ChecksumFCCF678E64A63D3946E45DFEB41EF7C6
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
KX897545 EMBL· GenBank· DDBJ | APP88405.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
KY124271 EMBL· GenBank· DDBJ | AQX45172.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LC490351 EMBL· GenBank· DDBJ | BBL86389.1 EMBL· GenBank· DDBJ | Genomic DNA |