A0A1D6GXR8 · A0A1D6GXR8_MAIZE
- ProteinHECT-type E3 ubiquitin transferase
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids1833 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score2/5
Function
Catalytic activity
Features
Showing features for active site.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Active site | 1800 | Glycyl thioester intermediate | |||
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Molecular Function | ligase activity | |
Molecular Function | ubiquitin protein ligase activity | |
Biological Process | proteasome-mediated ubiquitin-dependent protein catabolic process | |
Biological Process | protein polyubiquitination |
Keywords
- Molecular function
- Biological process
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameHECT-type E3 ubiquitin transferase
- EC number
Gene names
Organism names
- Organism
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > PACMAD clade > Panicoideae > Andropogonodae > Andropogoneae > Tripsacinae > Zea
Accessions
- Primary accessionA0A1D6GXR8
Proteomes
Genome annotation databases
PTM/Processing
Proteomic databases
Family & Domains
Features
Showing features for region, compositional bias, domain.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Region | 1-86 | Disordered | |||
Compositional bias | 9-35 | Polar residues | |||
Compositional bias | 51-65 | Basic and acidic residues | |||
Region | 458-478 | Disordered | |||
Region | 595-641 | Disordered | |||
Compositional bias | 930-953 | Polar residues | |||
Region | 930-1019 | Disordered | |||
Compositional bias | 992-1015 | Basic and acidic residues | |||
Compositional bias | 1031-1047 | Acidic residues | |||
Region | 1031-1107 | Disordered | |||
Compositional bias | 1073-1107 | Polar residues | |||
Domain | 1441-1833 | HECT | |||
Sequence similarities
Belongs to the UPL family. K-HECT subfamily.
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length1,833
- Mass (Da)198,791
- Last updated2016-11-30 v1
- MD5 Checksum225B9B88FEDE2FFADC012E5CBF073B42
Computationally mapped potential isoform sequences
There are 2 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
B4FDU1 | B4FDU1_MAIZE | 100193107 | 163 | ||
A0A804PDR6 | A0A804PDR6_MAIZE | 1780 |
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Compositional bias | 9-35 | Polar residues | |||
Compositional bias | 51-65 | Basic and acidic residues | |||
Compositional bias | 930-953 | Polar residues | |||
Compositional bias | 992-1015 | Basic and acidic residues | |||
Compositional bias | 1031-1047 | Acidic residues | |||
Compositional bias | 1073-1107 | Polar residues | |||
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
CM000781 EMBL· GenBank· DDBJ | AQK67597.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CM000781 EMBL· GenBank· DDBJ | AQK67601.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CM000781 EMBL· GenBank· DDBJ | AQK67602.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CM000781 EMBL· GenBank· DDBJ | AQK67604.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CM000781 EMBL· GenBank· DDBJ | AQK67610.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CM000781 EMBL· GenBank· DDBJ | AQK67618.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CM000781 EMBL· GenBank· DDBJ | AQK67620.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CM000781 EMBL· GenBank· DDBJ | AQK67629.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CM000781 EMBL· GenBank· DDBJ | AQK67638.1 EMBL· GenBank· DDBJ | Genomic DNA |