A0A1B1FD96 · A0A1B1FD96_9POAL
- ProteinDNA-directed RNA polymerase subunit gamma
- GenerpoC1
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids682 (go to sequence)
- Protein existenceInferred from homology
- Annotation score3/5
Function
function
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
Catalytic activity
- RNA(n) + a ribonucleoside 5'-triphosphate = RNA(n+1) + diphosphate
Cofactor
Protein has several cofactor binding sites:
Note: Binds 1 Mg2+ ion per subunit.
Note: Binds 1 Zn2+ ion per subunit.
Features
Showing features for binding site.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Binding site | 69 | Zn2+ (UniProtKB | ChEBI) | |||
Binding site | 71 | Zn2+ (UniProtKB | ChEBI) | |||
Binding site | 87 | Zn2+ (UniProtKB | ChEBI) | |||
Binding site | 90 | Zn2+ (UniProtKB | ChEBI) | |||
Binding site | 489 | Mg2+ (UniProtKB | ChEBI) | |||
Binding site | 491 | Mg2+ (UniProtKB | ChEBI) | |||
Binding site | 493 | Mg2+ (UniProtKB | ChEBI) | |||
GO annotations
Aspect | Term | |
---|---|---|
Cellular Component | DNA-directed RNA polymerase complex | |
Cellular Component | plastid | |
Molecular Function | DNA binding | |
Molecular Function | DNA-directed 5'-3' RNA polymerase activity | |
Molecular Function | magnesium ion binding | |
Molecular Function | zinc ion binding | |
Biological Process | DNA-templated transcription |
Keywords
- Molecular function
- Biological process
- Ligand
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameDNA-directed RNA polymerase subunit gamma
- EC number
- Short namesRNAP subunit gamma
- Alternative names
Gene names
Encoded on
- Plastid
Organism names
- Organism
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Bambusoideae > Arundinarodae > Arundinarieae > Arundinariinae > Pseudosasa
Accessions
- Primary accessionA0A1B1FD96
Subcellular Location
UniProt Annotation
GO Annotation
Keywords
- Cellular component
Structure
Family & Domains
Features
Showing features for domain.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Domain | 262-543 | RNA polymerase N-terminal | |||
Sequence similarities
Belongs to the RNA polymerase beta' chain family. RpoC1 subfamily.
Family and domain databases
Sequence
- Sequence statusComplete
- Length682
- Mass (Da)78,174
- Last updated2016-11-02 v1
- Checksum8DEABD225EBAD83C
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
KU569974 EMBL· GenBank· DDBJ | ANQ39175.1 EMBL· GenBank· DDBJ | Genomic DNA |