A0A178V8E8 · A0A178V8E8_ARATH
- ProteinUbiquitin receptor RAD23
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids419 (go to sequence)
- Protein existenceInferred from homology
- Annotation score2/5
Function
function
Multiubiquitin chain receptor involved in modulation of proteasomal degradation. Involved in nucleotide excision repair.
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | cytoplasm | |
Cellular Component | nucleus | |
Molecular Function | damaged DNA binding | |
Molecular Function | polyubiquitin modification-dependent protein binding | |
Molecular Function | ubiquitin binding | |
Biological Process | nucleotide-excision repair | |
Biological Process | proteasome-mediated ubiquitin-dependent protein catabolic process |
Keywords
- Biological process
Names & Taxonomy
Protein names
- Recommended nameUbiquitin receptor RAD23
- Alternative names
Gene names
Organism names
- Strains
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionA0A178V8E8
- Secondary accessions
Proteomes
Expression
Gene expression databases
Structure
Family & Domains
Features
Showing features for domain, compositional bias, region.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 1-79 | Ubiquitin-like | ||||
Sequence: MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIEENKVAENSFIVIMMNKSKP | ||||||
Compositional bias | 83-116 | Polar residues | ||||
Sequence: AASSASAGTSQAKSIPPSTSQPSISPQTPASVSA | ||||||
Region | 83-171 | Disordered | ||||
Sequence: AASSASAGTSQAKSIPPSTSQPSISPQTPASVSAPVAPAPTRPPPPALTPTPAPVAATETVTTPIPEPVPATISSSTPAPDSAPVGSQG | ||||||
Compositional bias | 118-134 | Pro residues | ||||
Sequence: VAPAPTRPPPPALTPTP | ||||||
Compositional bias | 147-165 | Polar residues | ||||
Sequence: IPEPVPATISSSTPAPDSA | ||||||
Domain | 185-228 | UBA | ||||
Sequence: SNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTG | ||||||
Region | 235-278 | Disordered | ||||
Sequence: VPPVARPPASAGQPANPPAQTQQPAAAPASGPNANPLDLFPQGL | ||||||
Compositional bias | 249-263 | Polar residues | ||||
Sequence: ANPPAQTQQPAAAPA | ||||||
Domain | 372-413 | UBA | ||||
Sequence: THEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDH |
Sequence similarities
Belongs to the RAD23 family.
Keywords
- Domain
Family and domain databases
Sequence
- Sequence statusComplete
- Length419
- Mass (Da)44,263
- Last updated2016-09-07 v1
- Checksum43E53ED0AAA0805C
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 83-116 | Polar residues | ||||
Sequence: AASSASAGTSQAKSIPPSTSQPSISPQTPASVSA | ||||||
Compositional bias | 118-134 | Pro residues | ||||
Sequence: VAPAPTRPPPPALTPTP | ||||||
Compositional bias | 147-165 | Polar residues | ||||
Sequence: IPEPVPATISSSTPAPDSA | ||||||
Compositional bias | 249-263 | Polar residues | ||||
Sequence: ANPPAQTQQPAAAPA |