A0A178V3Y7 · A0A178V3Y7_ARATH
- ProteinAuxin-responsive protein
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids305 (go to sequence)
- Protein existenceInferred from homology
- Annotation score2/5
Function
function
Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | nucleus | |
Biological Process | auxin-activated signaling pathway | |
Biological Process | regulation of DNA-templated transcription |
Keywords
- Molecular function
- Biological process
Names & Taxonomy
Protein names
- Recommended nameAuxin-responsive protein
Gene names
Organism names
- Strains
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionA0A178V3Y7
- Secondary accessions
Proteomes
Genome annotation databases
Subcellular Location
Expression
Gene expression databases
Interaction
Subunit
Homodimers and heterodimers.
Structure
Family & Domains
Features
Showing features for compositional bias, region, domain.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Compositional bias | 96-118 | Polar residues | |||
Region | 96-119 | Disordered | |||
Compositional bias | 155-170 | Polar residues | |||
Region | 155-180 | Disordered | |||
Domain | 185-287 | PB1 | |||
Sequence similarities
Belongs to the Aux/IAA family.
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length305
- Mass (Da)33,196
- Last updated2016-09-07 v1
- Checksum18F83E199FFC0A84
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Compositional bias | 96-118 | Polar residues | |||
Compositional bias | 155-170 | Polar residues | |||
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
CACSHJ010000095 EMBL· GenBank· DDBJ | CAA0396871.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LR881469 EMBL· GenBank· DDBJ | CAD5329411.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
LUHQ01000004 EMBL· GenBank· DDBJ | OAP00919.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CACRSJ010000109 EMBL· GenBank· DDBJ | VYS64286.1 EMBL· GenBank· DDBJ | Genomic DNA |