A0A151ERL1 · A0A151ERL1_THEAD

Function

function

DNA-dependent RNA polymerase (RNAP) catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Catalytic activity

Cofactor

[3Fe-4S] cluster (UniProtKB | Rhea| CHEBI:21137 )

Note: Binds 1 [3Fe-4S] cluster.

Features

Showing features for binding site.

TypeIDPosition(s)Description
Binding site199[3Fe-4S] cluster (UniProtKB | ChEBI)
Binding site202[3Fe-4S] cluster (UniProtKB | ChEBI)
Binding site205[3Fe-4S] cluster (UniProtKB | ChEBI)

GO annotations

AspectTerm
Cellular Componentcytoplasm
Cellular ComponentDNA-directed RNA polymerase complex
Molecular Function3 iron, 4 sulfur cluster binding
Molecular FunctionDNA binding
Molecular FunctionDNA-directed 5'-3' RNA polymerase activity
Molecular Functionmetal ion binding
Molecular Functionprotein dimerization activity
Biological ProcessDNA-templated transcription

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    DNA-directed RNA polymerase subunit Rpo3
  • EC number
  • Alternative names
    • DNA-directed RNA polymerase subunit D

Gene names

    • Name
      rpo3
    • Synonyms
      rpoD
    • ORF names
      AYK19_17110

Organism names

Accessions

  • Primary accession
    A0A151ERL1

Proteomes

Subcellular Location

Keywords

Interaction

Subunit

Part of the RNA polymerase complex.

Protein-protein interaction databases

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain160-1894Fe-4S ferredoxin-type
Domain191-2194Fe-4S ferredoxin-type

Sequence similarities

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    260
  • Mass (Da)
    28,937
  • Last updated
    2016-06-08 v1
  • MD5 Checksum
    EAF03FD4CC4EA81E1785E6ABDBEC8A11
MEIRVLHRGENTIQFIIEGVDAAFVNALRRAFVSDIPTFAADYVMFYSNTSPLYDETIAHRLAMIPLTTETERYIPAEECCEEGCEKCSVTLSLSKEGPGMVMSGDLISEDSDVVPAYDNIPIVKLGINQKLTLNVIARIGYAKDHAKWQAAIASYQHVPHVTVNTDMCDLGGACIEECPRNVLDILDDQLVPKYLYSCNLCGACMDVCDYDAITVEPVEDSFIFRLESFGNMSINDLIQEVVKLFSKKADSLLENVKKL

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
LSSC01000122
EMBL· GenBank· DDBJ
KYK31260.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.
Help