A0A140LII6 · A0A140LII6_MOUSE
- ProteinU2 small nuclear RNA auxiliary factor 1-like 4
- GeneU2af1l4
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids122 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score2/5
Function
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | nuclear speck | |
Cellular Component | U2AF complex | |
Molecular Function | metal ion binding | |
Molecular Function | RNA binding | |
Biological Process | mRNA splicing, via spliceosome |
Keywords
- Biological process
- Ligand
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Organism
- Strain
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Glires > Rodentia > Myomorpha > Muroidea > Muridae > Murinae > Mus > Mus
Accessions
- Primary accessionA0A140LII6
Proteomes
Organism-specific databases
Subcellular Location
PTM/Processing
Proteomic databases
Expression
Gene expression databases
Structure
Family & Domains
Features
Showing features for domain, zinc finger, region, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 51-78 | C3H1-type | ||||
Sequence: DFRESCCRQYEMGECTRGGFCNFMHLRP | ||||||
Zinc finger | 51-78 | C3H1-type | ||||
Sequence: DFRESCCRQYEMGECTRGGFCNFMHLRP | ||||||
Region | 84-122 | Disordered | ||||
Sequence: RRQLYGRGPRHRSPPRSHTGHRPRERNRRRSPDHRHGRF | ||||||
Compositional bias | 87-122 | Basic residues | ||||
Sequence: LYGRGPRHRSPPRSHTGHRPRERNRRRSPDHRHGRF |
Sequence similarities
Belongs to the splicing factor SR family.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length122
- Mass (Da)14,483
- Last updated2016-05-11 v1
- Checksum9FD16801A3560795
Computationally mapped potential isoform sequences
There are 16 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
Q8BGJ9 | U2AF4_MOUSE | U2af1l4 | 220 | ||
E9Q809 | E9Q809_MOUSE | U2af1l4 | 102 | ||
E9PWA1 | E9PWA1_MOUSE | U2af1l4 | 105 | ||
E9PWX6 | E9PWX6_MOUSE | U2af1l4 | 37 | ||
E9PWM2 | E9PWM2_MOUSE | U2af1l4 | 46 | ||
E9Q5D0 | E9Q5D0_MOUSE | U2af1l4 | 55 | ||
E9Q5J3 | E9Q5J3_MOUSE | U2af1l4 | 216 | ||
E9Q5Y2 | E9Q5Y2_MOUSE | U2af1l4 | 181 | ||
E9PUZ3 | E9PUZ3_MOUSE | U2af1l4 | 187 | ||
E9Q3S9 | E9Q3S9_MOUSE | U2af1l4 | 119 | ||
E9Q1I7 | E9Q1I7_MOUSE | U2af1l4 | 210 | ||
F7D8X7 | F7D8X7_MOUSE | U2af1l4 | 53 | ||
F8WH71 | F8WH71_MOUSE | Gm49396 | 146 | ||
F7A6Z4 | F7A6Z4_MOUSE | U2af1l4 | 24 | ||
A0A140LII3 | A0A140LII3_MOUSE | U2af1l4 | 90 | ||
A0A140LHB1 | A0A140LHB1_MOUSE | U2af1l4 | 120 |
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 87-122 | Basic residues | ||||
Sequence: LYGRGPRHRSPPRSHTGHRPRERNRRRSPDHRHGRF |
Keywords
- Technical term