A0A140LII6 · A0A140LII6_MOUSE

  • Protein
    U2 small nuclear RNA auxiliary factor 1-like 4
  • Gene
    U2af1l4
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Evidence at protein level
  • Annotation score
    2/5

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnuclear speck
Cellular ComponentU2AF complex
Molecular Functionmetal ion binding
Molecular FunctionRNA binding
Biological ProcessmRNA splicing, via spliceosome

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • U2 small nuclear RNA auxiliary factor 1-like 4

Gene names

    • Name
      U2af1l4

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • C57BL/6J
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Glires > Rodentia > Myomorpha > Muroidea > Muridae > Murinae > Mus > Mus

Accessions

  • Primary accession
    A0A140LII6

Proteomes

Organism-specific databases

Subcellular Location

Keywords

  • Cellular component

PTM/Processing

Proteomic databases

Expression

Gene expression databases

Family & Domains

Features

Showing features for domain, zinc finger, region, compositional bias.

TypeIDPosition(s)Description
Domain51-78C3H1-type
Zinc finger51-78C3H1-type
Region84-122Disordered
Compositional bias87-122Basic residues

Sequence similarities

Belongs to the splicing factor SR family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    122
  • Mass (Da)
    14,483
  • Last updated
    2016-05-11 v1
  • Checksum
    9FD16801A3560795
MNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLYGRGPRHRSPPRSHTGHRPRERNRRRSPDHRHGRF

Computationally mapped potential isoform sequences

There are 16 potential isoforms mapped to this entry

View all
EntryEntry nameGene nameLength
Q8BGJ9U2AF4_MOUSEU2af1l4220
E9Q809E9Q809_MOUSEU2af1l4102
E9PWA1E9PWA1_MOUSEU2af1l4105
E9PWX6E9PWX6_MOUSEU2af1l437
E9PWM2E9PWM2_MOUSEU2af1l446
E9Q5D0E9Q5D0_MOUSEU2af1l455
E9Q5J3E9Q5J3_MOUSEU2af1l4216
E9Q5Y2E9Q5Y2_MOUSEU2af1l4181
E9PUZ3E9PUZ3_MOUSEU2af1l4187
E9Q3S9E9Q3S9_MOUSEU2af1l4119
E9Q1I7E9Q1I7_MOUSEU2af1l4210
F7D8X7F7D8X7_MOUSEU2af1l453
F8WH71F8WH71_MOUSEGm49396146
F7A6Z4F7A6Z4_MOUSEU2af1l424
A0A140LII3A0A140LII3_MOUSEU2af1l490
A0A140LHB1A0A140LHB1_MOUSEU2af1l4120

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias87-122Basic residues

Keywords

Genome annotation databases

Similar Proteins

Disclaimer

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