A0A0W0CTL4 · A0A0W0CTL4_CANGB

Function

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleolar chromatin
Cellular ComponentSAGA complex
Cellular Componentsite of double-strand break
Cellular ComponentSLIK (SAGA-like) complex
Molecular FunctionATP binding
Molecular FunctionATP hydrolysis activity
Molecular FunctionATP-dependent chromatin remodeler activity
Molecular Functionchromatin DNA binding
Molecular Functionhelicase activity
Molecular Functionmethylated histone binding
Molecular FunctionrDNA binding
Molecular Functiontranscription cis-regulatory region binding
Biological ProcessDNA double-strand break processing
Biological Processdouble-strand break repair via homologous recombination
Biological Processnegative regulation of DNA-templated DNA replication
Biological Processnucleosome organization
Biological Processregulation of chromatin organization
Biological Processregulation of transcriptional start site selection at RNA polymerase II promoter
Biological Processsister chromatid cohesion
Biological Processtermination of RNA polymerase I transcription
Biological Processtermination of RNA polymerase II transcription
Biological Processtranscription elongation by RNA polymerase II

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Chromo domain-containing protein 1

Gene names

    • ORF names
      AO440_004801

Organism names

Accessions

  • Primary accession
    A0A0W0CTL4

Proteomes

Organism-specific databases

Subcellular Location

Keywords

  • Cellular component

Family & Domains

Features

Showing features for region, compositional bias, domain.

Type
IDPosition(s)Description
Region1-140Disordered
Compositional bias38-52Basic and acidic residues
Compositional bias53-97Acidic residues
Compositional bias106-122Polar residues
Region154-194Disordered
Compositional bias156-176Acidic residues
Domain210-272Chromo
Domain300-365Chromo
Domain403-577Helicase ATP-binding
Domain714-875Helicase C-terminal
Region987-1019Disordered
Compositional bias1001-1019Basic and acidic residues
Region1233-1264Disordered
Compositional bias1281-1299Polar residues
Region1281-1386Disordered
Compositional bias1307-1327Polar residues
Compositional bias1352-1372Polar residues

Sequence similarities

Belongs to the SNF2/RAD54 helicase family.

Keywords

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    1,476
  • Mass (Da)
    169,600
  • Last updated
    2016-03-16 v1
  • Checksum
    8C403B535C214AC5
MKEIDEEVLQNPELYGLRRSHRAVAHRPYVDDEEDEDDVPVKTRKRRSALVDDEDDDDENANDDISDDYDDYDNDSAADDDDDEDGDDDDMDEDDDDDYRGSPQKKRSSRGSGRGNSYKKKTAATRNVKREKQVAIPTRFSSRANKQVNYNIDYSDDDLLESEEEFDSDEDELLDEDQESRARSNTPPQEDVHGIDMVITHRIKEGSDKEHLAKIVPELNVCKENYEFQIKWTDQSHLHNTWETYESLAGVKGIKRLDNYCKQYIIQEQQVRLDPYITPEDIEIMDMEHERRLDELQEFTNPERIIDSQRVELEDGTSQLQYLVKWRHLNYDEATWEDAAEIVKIAPEPVKHFQSRQNSKILPQYSSNYTSERPRFEKLSVQPPFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHLVVVPLSTMPAWIETFEKWAPDIDVICYMGNQKSRDIERQYEFYSNPKGKGKKQIKFNVLMTTYEYILKDRAELGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEEQEQYIRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGRFSMLNIMNTLMKASNHPYLFDSAEEKVLEKFGAGNMSRENILRGLIMSSGKMVLLDKLLTRLKKDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSNQRRIAIDHFNAPGSDDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKYTKKTEPSAGELSEILKFGAGNMFAAKDNQKKLEDLNLDDVLSHAEDHVTTPDLGESHLGGEEFLKQFEVTDYKADVDWDDIIPEEELKKLQDEEQRHKDEEYVKEQLEMMNRRNNALKKIKDSVNGEGSTVTSDDEDGRSSRRRAKTNDLNSIGDSEVRALYRAVLRFGDVTDKLDELIADGTLPVKSIEKYKEILEELLDEAKSIYEEEDTKRTQTLREFEAAAHEYKMKLKTGEIKAEEQEKDNPITRLTMKRREKKAILFTFHKVKSLNAESIVNRCRDLEFVNNYFKTHFKNDPLEFKFDKAHPKPVTNWNCDWNQMDDEKLMVGIHKYGYGAWAQIRDDPFLGLTNKIFLSDVSSAATDKVKEEVKQETPDATGGKRSKGRESKKVPGALHLGRRVDYLIDFLQNDGKPTTGASGSSSISESSRKTAANPRKRNRKPNNTSSFSETSASGTPELGKLDSPGQPTKRIKALPKGPASLVSRNKKTNSPQRDGNKENENGTSGAHAKEYDSMDEEECRHTMTSMRSSLKRLRRGGKGLDRREWAKILKSELTAIGDYIEAQAKKNKNPDRHRKHLWSYSSNFWPAAVKSAKLMEMYKKITSAEK

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias38-52Basic and acidic residues
Compositional bias53-97Acidic residues
Compositional bias106-122Polar residues
Compositional bias156-176Acidic residues
Compositional bias1001-1019Basic and acidic residues
Compositional bias1281-1299Polar residues
Compositional bias1307-1327Polar residues
Compositional bias1352-1372Polar residues

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
LLZZ01000122
EMBL· GenBank· DDBJ
KTB02924.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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