A0A0U1RQQ2 · A0A0U1RQQ2_HUMAN
- ProteinSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
- GeneSMARCB1
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids
- Protein existenceEvidence at protein level
- Annotation score1/5
Function
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Organism
- Taxonomic lineagecellular organisms > Eukaryota (eucaryotes) > Opisthokonta > Metazoa (metazoans) > Eumetazoa > Bilateria > Deuterostomia > Chordata (chordates) > Craniata > Vertebrata (vertebrates) > Gnathostomata (jawed vertebrates) > Teleostomi > Euteleostomi (bony vertebrates) > Sarcopterygii > Dipnotetrapodomorpha > Tetrapoda (tetrapods) > Amniota (amniotes) > Mammalia (mammals) > Theria > Eutheria (placentals) > Boreoeutheria > Euarchontoglires > Primates > Haplorrhini > Simiiformes > Catarrhini > Hominoidea (apes) > Hominidae (great apes) > Homininae > Homo
Accessions
- Primary accessionA0A0U1RQQ2
Proteomes
Organism-specific databases
Disease & Variants
Variants
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The viewer provides 335 variants from UniProt as well as other sources including ClinVar and dbSNP.
Genetic variation databases
PTM/Processing
Proteomic databases
Expression
Gene expression databases
Structure
Family & Domains
Features
Showing features for domain, region, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 2-46 | SWI/SNF Subunit INI1 DNA binding | ||||
Sequence: WRRLATVEERKKIVASSHDHGYTTLATSVTLLKASEVEEILDGND | ||||||
Region | 60-81 | Disordered | ||||
Sequence: TYLREQKAKRNSHFDDHDPAVI | ||||||
Compositional bias | 62-81 | Basic and acidic residues | ||||
Sequence: LREQKAKRNSHFDDHDPAVI |
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusFragment
- Length81
- Mass (Da)9,205
- Last updated2016-02-17 v1
- Checksum2A5BF879C94E7EFB
Computationally mapped potential isoform sequences
There are 11 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
Q12824 | SNF5_HUMAN | SMARCB1 | 385 | ||
A0A0U1RRB8 | A0A0U1RRB8_HUMAN | SMARCB1 | 90 | ||
A0A2R8Y5Z2 | A0A2R8Y5Z2_HUMAN | SMARCB1 | 32 | ||
A0A2R8Y5N5 | A0A2R8Y5N5_HUMAN | SMARCB1 | 271 | ||
A0A2R8YDN6 | A0A2R8YDN6_HUMAN | SMARCB1 | 78 | ||
A0A2R8YEE8 | A0A2R8YEE8_HUMAN | SMARCB1 | 216 | ||
C9JTA6 | C9JTA6_HUMAN | SMARCB1 | 248 | ||
B5MCL5 | B5MCL5_HUMAN | SMARCB1 | 147 | ||
A0A0G2JSE9 | A0A0G2JSE9_HUMAN | SMARCB1 | 227 | ||
A0A0G2JRV3 | A0A0G2JRV3_HUMAN | SMARCB1 | 339 | ||
G5E975 | G5E975_HUMAN | SMARCB1 | 394 |
Features
Showing features for non-terminal residue, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Non-terminal residue | 1 | |||||
Sequence: X | ||||||
Compositional bias | 62-81 | Basic and acidic residues | ||||
Sequence: LREQKAKRNSHFDDHDPAVI | ||||||
Non-terminal residue | 81 | |||||
Sequence: I |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AP000349 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AP000350 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. |