A0A0S3QZA6 · A0A0S3QZA6_PHAAN
- ProteinHomeobox domain-containing protein
- GeneVigan.01G120200
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids1801 (go to sequence)
- Protein existencePredicted
- Annotation score2/5
Function
Features
Showing features for dna binding.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
DNA binding | 47-106 | Homeobox | ||||
Sequence: SKPKRQMKTPFQLETLEKAYAVDNYPSETMRGELSEKLGLSDRQLQMWFCHRRLKDKKDL |
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | nucleus | |
Molecular Function | DNA binding | |
Biological Process | regulation of transcription by RNA polymerase II |
Keywords
- Molecular function
- Biological process
Names & Taxonomy
Protein names
- Recommended nameHomeobox domain-containing protein
Gene names
Organism names
- Organism
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > fabids > Fabales > Fabaceae > Papilionoideae > 50 kb inversion clade > NPAAA clade > indigoferoid/millettioid clade > Phaseoleae > Vigna
Accessions
- Primary accessionA0A0S3QZA6
Proteomes
Subcellular Location
Structure
Family & Domains
Features
Showing features for compositional bias, region, domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-21 | Basic and acidic residues | ||||
Sequence: MEGEACSEGENNRKRGGTDDD | ||||||
Region | 1-57 | Disordered | ||||
Sequence: MEGEACSEGENNRKRGGTDDDSNENNNNNDSNHGISSKIVNSNEGQSKPKRQMKTPF | ||||||
Compositional bias | 22-54 | Polar residues | ||||
Sequence: SNENNNNNDSNHGISSKIVNSNEGQSKPKRQMK | ||||||
Domain | 45-105 | Homeobox | ||||
Sequence: GQSKPKRQMKTPFQLETLEKAYAVDNYPSETMRGELSEKLGLSDRQLQMWFCHRRLKDKKD | ||||||
Region | 114-152 | Disordered | ||||
Sequence: KVVAEPLPESPTDDPMLSPPELGNEYGSGSGSGSSPYAR | ||||||
Compositional bias | 252-266 | Polar residues | ||||
Sequence: PTQAGTRSDTSGPFS | ||||||
Region | 252-272 | Disordered | ||||
Sequence: PTQAGTRSDTSGPFSKSHLHD | ||||||
Region | 400-441 | Disordered | ||||
Sequence: LRRKNEERMRKEIEKQDRERKKEEERLMRERQREEEKVRREQ | ||||||
Domain | 558-617 | DDT | ||||
Sequence: EKNVGNLLMVWRFLITFADVLELWSFTLDEFVQAFHDYDSRLLGEIHVALLKVVIKDIED | ||||||
Domain | 740-809 | HTH HARE-type | ||||
Sequence: GTVKFAAFHVLSLEGDKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDTKLFERIAPSTYCVRQA | ||||||
Compositional bias | 837-862 | Acidic residues | ||||
Sequence: AEEDTDDVEREESESDEIDEDPEVDD | ||||||
Region | 837-885 | Disordered | ||||
Sequence: AEEDTDDVEREESESDEIDEDPEVDDLVNSSSANKTSEPCDDFSSNGKE | ||||||
Compositional bias | 863-880 | Polar residues | ||||
Sequence: LVNSSSANKTSEPCDDFS | ||||||
Region | 1210-1253 | Disordered | ||||
Sequence: NTQCSKAGSRGETCVKNEADETDSSPDRHTGSDSPSSTLCGLNS | ||||||
Compositional bias | 1222-1237 | Basic and acidic residues | ||||
Sequence: TCVKNEADETDSSPDR | ||||||
Compositional bias | 1238-1253 | Polar residues | ||||
Sequence: HTGSDSPSSTLCGLNS | ||||||
Compositional bias | 1541-1560 | Polar residues | ||||
Sequence: SNNKRGRGSALKGRSKSISK | ||||||
Region | 1541-1801 | Disordered | ||||
Sequence: SNNKRGRGSALKGRSKSISKTKQNNGRRHSAKVAGNLNQRVKQQGGGSQGQAGGRGRRTVRKRRMGKKAVEDLLLGHRGASRNNNIARESLRNLDEDWDDQKGSPMTPIHMGTANISNSTEEAESDDNVQAMESDDNVQAVESDDNGQAVESDDNGQAMESDDNGQAVESDDNGQAVEYDQGNWEIGFNGNPSRWQGDLVGTSDEDVEASEDDNHNDNGIEENEEEDSEGDVMSEGSDGTANRIVNEEESSDSDVSEDSSD | ||||||
Compositional bias | 1568-1590 | Polar residues | ||||
Sequence: RHSAKVAGNLNQRVKQQGGGSQG | ||||||
Compositional bias | 1629-1643 | Basic and acidic residues | ||||
Sequence: ESLRNLDEDWDDQKG | ||||||
Compositional bias | 1648-1665 | Polar residues | ||||
Sequence: PIHMGTANISNSTEEAES | ||||||
Compositional bias | 1672-1711 | Polar residues | ||||
Sequence: MESDDNVQAVESDDNGQAVESDDNGQAMESDDNGQAVESD | ||||||
Compositional bias | 1744-1773 | Acidic residues | ||||
Sequence: DEDVEASEDDNHNDNGIEENEEEDSEGDVM |
Keywords
- Domain
Family and domain databases
Sequence
- Sequence statusComplete
- Length1,801
- Mass (Da)201,618
- Last updated2016-02-17 v1
- ChecksumCF462D9E78639925
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-21 | Basic and acidic residues | ||||
Sequence: MEGEACSEGENNRKRGGTDDD | ||||||
Compositional bias | 22-54 | Polar residues | ||||
Sequence: SNENNNNNDSNHGISSKIVNSNEGQSKPKRQMK | ||||||
Compositional bias | 252-266 | Polar residues | ||||
Sequence: PTQAGTRSDTSGPFS | ||||||
Compositional bias | 837-862 | Acidic residues | ||||
Sequence: AEEDTDDVEREESESDEIDEDPEVDD | ||||||
Compositional bias | 863-880 | Polar residues | ||||
Sequence: LVNSSSANKTSEPCDDFS | ||||||
Compositional bias | 1222-1237 | Basic and acidic residues | ||||
Sequence: TCVKNEADETDSSPDR | ||||||
Compositional bias | 1238-1253 | Polar residues | ||||
Sequence: HTGSDSPSSTLCGLNS | ||||||
Compositional bias | 1541-1560 | Polar residues | ||||
Sequence: SNNKRGRGSALKGRSKSISK | ||||||
Compositional bias | 1568-1590 | Polar residues | ||||
Sequence: RHSAKVAGNLNQRVKQQGGGSQG | ||||||
Compositional bias | 1629-1643 | Basic and acidic residues | ||||
Sequence: ESLRNLDEDWDDQKG | ||||||
Compositional bias | 1648-1665 | Polar residues | ||||
Sequence: PIHMGTANISNSTEEAES | ||||||
Compositional bias | 1672-1711 | Polar residues | ||||
Sequence: MESDDNVQAVESDDNGQAVESDDNGQAMESDDNGQAVESD | ||||||
Compositional bias | 1744-1773 | Acidic residues | ||||
Sequence: DEDVEASEDDNHNDNGIEENEEEDSEGDVM |
Keywords
- Technical term