A0A0S3QZA6 · A0A0S3QZA6_PHAAN

Function

Features

Showing features for dna binding.

118012004006008001,0001,2001,4001,6001,800
TypeIDPosition(s)Description
DNA binding47-106Homeobox

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Molecular FunctionDNA binding
Biological Processregulation of transcription by RNA polymerase II

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Homeobox domain-containing protein

Gene names

    • Name
      Vigan.01G120200
    • ORF names
      VIGAN_01120200

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Shumari
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > fabids > Fabales > Fabaceae > Papilionoideae > 50 kb inversion clade > NPAAA clade > indigoferoid/millettioid clade > Phaseoleae > Vigna

Accessions

  • Primary accession
    A0A0S3QZA6

Proteomes

Subcellular Location

Keywords

  • Cellular component

Family & Domains

Features

Showing features for compositional bias, region, domain.

TypeIDPosition(s)Description
Compositional bias1-21Basic and acidic residues
Region1-57Disordered
Compositional bias22-54Polar residues
Domain45-105Homeobox
Region114-152Disordered
Compositional bias252-266Polar residues
Region252-272Disordered
Region400-441Disordered
Domain558-617DDT
Domain740-809HTH HARE-type
Compositional bias837-862Acidic residues
Region837-885Disordered
Compositional bias863-880Polar residues
Region1210-1253Disordered
Compositional bias1222-1237Basic and acidic residues
Compositional bias1238-1253Polar residues
Compositional bias1541-1560Polar residues
Region1541-1801Disordered
Compositional bias1568-1590Polar residues
Compositional bias1629-1643Basic and acidic residues
Compositional bias1648-1665Polar residues
Compositional bias1672-1711Polar residues
Compositional bias1744-1773Acidic residues

Keywords

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    1,801
  • Mass (Da)
    201,618
  • Last updated
    2016-02-17 v1
  • Checksum
    CF462D9E78639925
MEGEACSEGENNRKRGGTDDDSNENNNNNDSNHGISSKIVNSNEGQSKPKRQMKTPFQLETLEKAYAVDNYPSETMRGELSEKLGLSDRQLQMWFCHRRLKDKKDLTSKKVPRKVVAEPLPESPTDDPMLSPPELGNEYGSGSGSGSSPYARVEPLNIVPRGVPGYYESPRAMMESRAIACVEAQLGEPLREDGPILGVEFDPLPPDAFGAPLATEQQKLPSFAYDSKIYERHDSRANKAMARTFRDYRSLPTQAGTRSDTSGPFSKSHLHDAMEGPARNLHLALGNETVPRIRPSQGQFRARLLSQQDKQLIPYQSPTRDDNAAPTRELDPTILNVGTSSHFADHQIVVPENLHAQPSGQVLHNNNAIRIEKKRKSDDVRDVEAHEMKIRKEIEKQDNLRRKNEERMRKEIEKQDRERKKEEERLMRERQREEEKVRREQKREIERREKFLLKENIRAEKMKIREELRKEKEAERRKAALEKATARRIAKESMELIEDEHLEMMELAASSKGFSSIIHLDFDTLQHIESFRDSLCVFPPKSVKLRKPFAIKPWINSEKNVGNLLMVWRFLITFADVLELWSFTLDEFVQAFHDYDSRLLGEIHVALLKVVIKDIEDVARTPSTGLGSNQNGAANAGGGHPEIVEGAYAWGFDIRNWHKHLNLLTWPEIFRQLALSAGYGPQLKKRSATCSYANNKDEGRSCEDIISKLRNGSAAENAVAKMHERGLLAPRRSRHRLTPGTVKFAAFHVLSLEGDKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDTKLFERIAPSTYCVRQAFRKNPADAESILSEARKKIQIFENGFLAEEDTDDVEREESESDEIDEDPEVDDLVNSSSANKTSEPCDDFSSNGKENLGHDVGLQGEFDKDLPHFPESSSKKVDTPIAVTGRKPGACEVLNVGNLGEDNMEIDESKPGESWVQGLAEGEYSDLSVEERLSALVVLVGVANEGNSIRVVLEDRLEAANALKKQMWAEAQLDKFRLKDDIFSKSDFPSLNGNKVEIQYSCPAAEGNQSPSLLGINIGNNSNIVPSPSTAENQKATPGVQSLSVEKHSSVQDLCTGPDNPQIQTFAQYSKRSRSQLKSYIFHIAEEMCAYRSLPLGQDRRRNRYWQFVASASSNDPGSGRIFVEFLDGNWRLIDTEEAFDALLNSLDSRGVRESHLRLMLQKVEGSFKENVHNNTQCSKAGSRGETCVKNEADETDSSPDRHTGSDSPSSTLCGLNSDSLETSSSFKIELGKSESDKKSALRRYQDFQKWTWKECYNSSILCAMKYGKKRCKPQVVVCDICLNPYFYEDSHCSCCHRTFPSNNGFNFSKHAFQCGDKLSKEICILDSSLPLRTRLLKALLAYIEVSIPPEAFQSTWIEDIRRHWSVKLSKTSSVEELLQILALLERALKRDFLSSTFSTTGEQLGLNTMSESAAQTSADPESVAVLPWVPLTTSAVSLRLFEFDESIVYVLHEKPEPREEKEDRQYIKLPSRHSASKSIKVSETADMGRDEFMKVKSNTVKIVQSNNKRGRGSALKGRSKSISKTKQNNGRRHSAKVAGNLNQRVKQQGGGSQGQAGGRGRRTVRKRRMGKKAVEDLLLGHRGASRNNNIARESLRNLDEDWDDQKGSPMTPIHMGTANISNSTEEAESDDNVQAMESDDNVQAVESDDNGQAVESDDNGQAMESDDNGQAVESDDNGQAVEYDQGNWEIGFNGNPSRWQGDLVGTSDEDVEASEDDNHNDNGIEENEEEDSEGDVMSEGSDGTANRIVNEEESSDSDVSEDSSD

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias1-21Basic and acidic residues
Compositional bias22-54Polar residues
Compositional bias252-266Polar residues
Compositional bias837-862Acidic residues
Compositional bias863-880Polar residues
Compositional bias1222-1237Basic and acidic residues
Compositional bias1238-1253Polar residues
Compositional bias1541-1560Polar residues
Compositional bias1568-1590Polar residues
Compositional bias1629-1643Basic and acidic residues
Compositional bias1648-1665Polar residues
Compositional bias1672-1711Polar residues
Compositional bias1744-1773Acidic residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AP015034
EMBL· GenBank· DDBJ
BAT73688.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

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