A0A0S2LR72 · A0A0S2LR72_9ROSI

  • Protein
    DNA-directed RNA polymerase subunit gamma
  • Gene
    rpoC1
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    3/5

Function

function

DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.

Catalytic activity

Cofactor

Protein has several cofactor binding sites:
Mg2+ (UniProtKB | Rhea| CHEBI:18420 )

Note: Binds 1 Mg2+ ion per subunit.
Zn2+ (UniProtKB | Rhea| CHEBI:29105 )

Note: Binds 1 Zn2+ ion per subunit.

Features

Showing features for binding site.

TypeIDPosition(s)Description
Binding site69Zn2+ (UniProtKB | ChEBI)
Binding site71Zn2+ (UniProtKB | ChEBI)
Binding site87Zn2+ (UniProtKB | ChEBI)
Binding site90Zn2+ (UniProtKB | ChEBI)
Binding site489Mg2+ (UniProtKB | ChEBI)
Binding site491Mg2+ (UniProtKB | ChEBI)
Binding site493Mg2+ (UniProtKB | ChEBI)

GO annotations

AspectTerm
Cellular ComponentDNA-directed RNA polymerase complex
Cellular Componentplastid
Molecular FunctionDNA binding
Molecular FunctionDNA-directed 5'-3' RNA polymerase activity
Molecular Functionmagnesium ion binding
Molecular Functionzinc ion binding
Biological ProcessDNA-templated transcription

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    DNA-directed RNA polymerase subunit gamma
  • EC number
  • Short names
    RNAP subunit gamma
  • Alternative names
    • RNA polymerase subunit gamma
    • Transcriptase subunit gamma

Gene names

    • Name
      rpoC1

Encoded on

  • Plastid

Organism names

  • Taxonomic identifier
  • Organism
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Malvales > Malvaceae > Tilioideae > Tilia

Accessions

  • Primary accession
    A0A0S2LR72

Subcellular Location

Keywords

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain262-543RNA polymerase N-terminal

Sequence similarities

Belongs to the RNA polymerase beta' chain family. RpoC1 subfamily.

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    685
  • Mass (Da)
    78,847
  • Last updated
    2016-02-17 v1
  • Checksum
    BC1B3E3C9EB2B5DA
MIDRYKHQQLRIGSVSPQQISAWANKILPNGETVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGNEKEGPKFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAIREQLADLDLRILIDYSLVEWKELGEEGLTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLAPNIGVAKSKIREKGTIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPWNRKNYQNERIDDNNYKYTKEPFFCNSYDAIGAYRQKRINLDSPLWLRWRLDQCVIASREAPIEVHYESLGTYHEIYGHYLIVRSVKKKILCIYIRTTVGHISLYREIEEAIQGFFRACSYDTQSYGI

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
KT894775
EMBL· GenBank· DDBJ
ALO63908.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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