A0A0R4IMX2 · A0A0R4IMX2_DANRE
- ProteinProtein transport protein Sec24C
- Genesec24c
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids1248 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score2/5
Function
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | COPII vesicle coat | |
Cellular Component | cytosol | |
Cellular Component | endoplasmic reticulum exit site | |
Cellular Component | endoplasmic reticulum membrane | |
Molecular Function | SNARE binding | |
Molecular Function | zinc ion binding | |
Biological Process | COPII-coated vesicle cargo loading | |
Biological Process | intracellular protein transport |
Keywords
- Biological process
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Ostariophysi > Cypriniformes > Danionidae > Danioninae > Danio
Accessions
- Primary accessionA0A0R4IMX2
- Secondary accessions
Proteomes
Organism-specific databases
Subcellular Location
UniProt Annotation
GO Annotation
Cytoplasmic vesicle, COPII-coated vesicle membrane ; Peripheral membrane protein
Endoplasmic reticulum membrane ; Peripheral membrane protein
Keywords
- Cellular component
PTM/Processing
Proteomic databases
Expression
Gene expression databases
Interaction
Protein-protein interaction databases
Structure
Family & Domains
Features
Showing features for region, compositional bias, domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 1-484 | Disordered | ||||
Sequence: MNVNQQPHMASPYGQPQPGYQRYPQPGYQRYPQPGYQRYPQPGYGGGHVPSGYPAQYAPDNGPGSGYQQGPPQGMREPPTSGTPPVSGAQSYSQFGQGETQNGPPPMVAPPQGTLVSQPHTPNAVSLSGPTQPPYGQQFGSPPIGMQQMTNQMASMQVGSTAPSPAGPGYAPPSTAQAPISAAYTPSAPPTFPPTSSAPSQPPPTEAVAQPPPLPYYGAPPPAQQPFPNAVSTFSSAGPTQPQAPPSVSQQSFPQAPAVSQPPFSTAPPPGPSQSYGGPLPPTQPSFQRAPLPTSQPGVFPGGPPPTSTHSQLPGPMPPQPPVSQPSPYYSEPPPTTASFPPQVGAPPRPPLAGMQGPPMASQGPLMASHGPPGASQEPPLQLQGPPMGSQGPTMAQVNHVPPSQPGMPPGPINASLSGPPPQPGMQGYPPQQNGAFGQVRGPQPGYAAPPYSGQPNYGAPPAAPAPAPAAPKRLDPDSIPSPI | ||||||
Compositional bias | 83-101 | Polar residues | ||||
Sequence: TPPVSGAQSYSQFGQGETQ | ||||||
Compositional bias | 114-135 | Polar residues | ||||
Sequence: TLVSQPHTPNAVSLSGPTQPPY | ||||||
Compositional bias | 141-162 | Polar residues | ||||
Sequence: SPPIGMQQMTNQMASMQVGSTA | ||||||
Compositional bias | 186-227 | Pro residues | ||||
Sequence: PSAPPTFPPTSSAPSQPPPTEAVAQPPPLPYYGAPPPAQQPF | ||||||
Compositional bias | 228-260 | Polar residues | ||||
Sequence: PNAVSTFSSAGPTQPQAPPSVSQQSFPQAPAVS | ||||||
Compositional bias | 261-288 | Pro residues | ||||
Sequence: QPPFSTAPPPGPSQSYGGPLPPTQPSFQ | ||||||
Compositional bias | 297-355 | Pro residues | ||||
Sequence: PGVFPGGPPPTSTHSQLPGPMPPQPPVSQPSPYYSEPPPTTASFPPQVGAPPRPPLAGM | ||||||
Compositional bias | 383-401 | Polar residues | ||||
Sequence: LQGPPMGSQGPTMAQVNHV | ||||||
Compositional bias | 403-428 | Pro residues | ||||
Sequence: PSQPGMPPGPINASLSGPPPQPGMQG | ||||||
Compositional bias | 455-476 | Pro residues | ||||
Sequence: QPNYGAPPAAPAPAPAAPKRLD | ||||||
Domain | 576-614 | Zinc finger Sec23/Sec24-type | ||||
Sequence: PIRCNRCKAYMCPFMQFIEGGRRFQCGFCSCVTEVPPHY | ||||||
Domain | 653-897 | Sec23/Sec24 trunk | ||||
Sequence: PQPPAFIFLIDVSYNAVKNGMVGMVCQELKTLMDYLPRENPDVESNVRVGFVTYNKVLHFYNVKASLAQPQMLVVSDVADMFVPLLDGFLVNVSESRVVIESLLDQIPEMFADTRETETVFGPVIQAGLEALKAADCAGKLFIFHSSLPIAEAPGKLKNREDKKLVGTDKEKSLFQPQVSFYNTLAKDCVAQGCCVDLFLFPNQYVDVATLGVVPTSTGGSIYKYTYFQASSDQERFLNDLRRDV | ||||||
Domain | 902-985 | Sec23/Sec24 beta-sandwich | ||||
Sequence: GFDAVMRVRTSTGIRATDFFGSFYMSNTTDVELAGLDCDKTVTVEFRHDDKLSEETGALMQCAVLYTSCSGQRRLRVHNMAVNC | ||||||
Domain | 998-1097 | Sec23/Sec24 helical | ||||
Sequence: TDTIINFFVKYAYRSVLSSPTKNVRDSLVNQCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGADVSLDDRAYLRQLVSAMDVAES | ||||||
Domain | 1117-1189 | Gelsolin-like | ||||
Sequence: SLPLAVRDSEERLSRGGVYLLENGLNIFIWVGVNAQQELLQNIFGTPAFSQIDPSMTSLPALDNPFSKRLKEI |
Sequence similarities
Belongs to the SEC23/SEC24 family. SEC24 subfamily.
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length1,248
- Mass (Da)134,951
- Last updated2016-01-20 v1
- Checksum994A54D3BFB96EBC
Computationally mapped potential isoform sequences
There are 4 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
A0A0R4IAZ9 | A0A0R4IAZ9_DANRE | sec24c | 1300 | ||
A0A8M6Z9C2 | A0A8M6Z9C2_DANRE | sec24c | 1291 | ||
A0A8M2B330 | A0A8M2B330_DANRE | sec24c | 1271 | ||
A0A8M2B375 | A0A8M2B375_DANRE | sec24c | 1277 |
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 83-101 | Polar residues | ||||
Sequence: TPPVSGAQSYSQFGQGETQ | ||||||
Compositional bias | 114-135 | Polar residues | ||||
Sequence: TLVSQPHTPNAVSLSGPTQPPY | ||||||
Compositional bias | 141-162 | Polar residues | ||||
Sequence: SPPIGMQQMTNQMASMQVGSTA | ||||||
Compositional bias | 186-227 | Pro residues | ||||
Sequence: PSAPPTFPPTSSAPSQPPPTEAVAQPPPLPYYGAPPPAQQPF | ||||||
Compositional bias | 228-260 | Polar residues | ||||
Sequence: PNAVSTFSSAGPTQPQAPPSVSQQSFPQAPAVS | ||||||
Compositional bias | 261-288 | Pro residues | ||||
Sequence: QPPFSTAPPPGPSQSYGGPLPPTQPSFQ | ||||||
Compositional bias | 297-355 | Pro residues | ||||
Sequence: PGVFPGGPPPTSTHSQLPGPMPPQPPVSQPSPYYSEPPPTTASFPPQVGAPPRPPLAGM | ||||||
Compositional bias | 383-401 | Polar residues | ||||
Sequence: LQGPPMGSQGPTMAQVNHV | ||||||
Compositional bias | 403-428 | Pro residues | ||||
Sequence: PSQPGMPPGPINASLSGPPPQPGMQG | ||||||
Compositional bias | 455-476 | Pro residues | ||||
Sequence: QPNYGAPPAAPAPAPAAPKRLD |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
CU469520 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
CU694198 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. |