A0A0R4IMX2 · A0A0R4IMX2_DANRE

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular ComponentCOPII vesicle coat
Cellular Componentcytosol
Cellular Componentendoplasmic reticulum exit site
Cellular Componentendoplasmic reticulum membrane
Molecular FunctionSNARE binding
Molecular Functionzinc ion binding
Biological ProcessCOPII-coated vesicle cargo loading
Biological Processintracellular protein transport

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Protein transport protein Sec24C
    • SEC24 homolog C, COPII coat complex component

Gene names

    • Name
      sec24c
    • Synonyms
      im:7145364
      , wu:fd10d12

Organism names

  • Taxonomic identifier
  • Strain
    • Tuebingen
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Ostariophysi > Cypriniformes > Danionidae > Danioninae > Danio

Accessions

  • Primary accession
    A0A0R4IMX2
  • Secondary accessions
    • A0A8M1NZ87

Proteomes

Organism-specific databases

Subcellular Location

Cytoplasm, cytosol
Cytoplasmic vesicle, COPII-coated vesicle membrane
; Peripheral membrane protein
Endoplasmic reticulum membrane
; Peripheral membrane protein

Keywords

PTM/Processing

Proteomic databases

Expression

Gene expression databases

Interaction

Protein-protein interaction databases

Family & Domains

Features

Showing features for region, compositional bias, domain.

TypeIDPosition(s)Description
Region1-484Disordered
Compositional bias83-101Polar residues
Compositional bias114-135Polar residues
Compositional bias141-162Polar residues
Compositional bias186-227Pro residues
Compositional bias228-260Polar residues
Compositional bias261-288Pro residues
Compositional bias297-355Pro residues
Compositional bias383-401Polar residues
Compositional bias403-428Pro residues
Compositional bias455-476Pro residues
Domain576-614Zinc finger Sec23/Sec24-type
Domain653-897Sec23/Sec24 trunk
Domain902-985Sec23/Sec24 beta-sandwich
Domain998-1097Sec23/Sec24 helical
Domain1117-1189Gelsolin-like

Sequence similarities

Belongs to the SEC23/SEC24 family. SEC24 subfamily.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    1,248
  • Mass (Da)
    134,951
  • Last updated
    2016-01-20 v1
  • Checksum
    994A54D3BFB96EBC
MNVNQQPHMASPYGQPQPGYQRYPQPGYQRYPQPGYQRYPQPGYGGGHVPSGYPAQYAPDNGPGSGYQQGPPQGMREPPTSGTPPVSGAQSYSQFGQGETQNGPPPMVAPPQGTLVSQPHTPNAVSLSGPTQPPYGQQFGSPPIGMQQMTNQMASMQVGSTAPSPAGPGYAPPSTAQAPISAAYTPSAPPTFPPTSSAPSQPPPTEAVAQPPPLPYYGAPPPAQQPFPNAVSTFSSAGPTQPQAPPSVSQQSFPQAPAVSQPPFSTAPPPGPSQSYGGPLPPTQPSFQRAPLPTSQPGVFPGGPPPTSTHSQLPGPMPPQPPVSQPSPYYSEPPPTTASFPPQVGAPPRPPLAGMQGPPMASQGPLMASHGPPGASQEPPLQLQGPPMGSQGPTMAQVNHVPPSQPGMPPGPINASLSGPPPQPGMQGYPPQQNGAFGQVRGPQPGYAAPPYSGQPNYGAPPAAPAPAPAAPKRLDPDSIPSPIQVIEDDKANKGSQPFTTGVRGQAPPLVTTRFQVKDQGNASPRYIRCTAYNMPCNSDMAKQSQVPLAAVIKPLATLPPDESPPYLVDHGESGPIRCNRCKAYMCPFMQFIEGGRRFQCGFCSCVTEVPPHYFQHLDHTGKRVDCYERPELSMGSYEFMATVDYCKNNKFPQPPAFIFLIDVSYNAVKNGMVGMVCQELKTLMDYLPRENPDVESNVRVGFVTYNKVLHFYNVKASLAQPQMLVVSDVADMFVPLLDGFLVNVSESRVVIESLLDQIPEMFADTRETETVFGPVIQAGLEALKAADCAGKLFIFHSSLPIAEAPGKLKNREDKKLVGTDKEKSLFQPQVSFYNTLAKDCVAQGCCVDLFLFPNQYVDVATLGVVPTSTGGSIYKYTYFQASSDQERFLNDLRRDVQKQMGFDAVMRVRTSTGIRATDFFGSFYMSNTTDVELAGLDCDKTVTVEFRHDDKLSEETGALMQCAVLYTSCSGQRRLRVHNMAVNCCSQLADLYRNCETDTIINFFVKYAYRSVLSSPTKNVRDSLVNQCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGADVSLDDRAYLRQLVSAMDVAESHVFFYPRLLPLQKLDAESTSLPLAVRDSEERLSRGGVYLLENGLNIFIWVGVNAQQELLQNIFGTPAFSQIDPSMTSLPALDNPFSKRLKEIIESIRAQRSRYMKLMVVKQEDKLELIFKHFLVEDKSNNGGASYVDFLCHMHKEIRQLLS

Computationally mapped potential isoform sequences

There are 4 potential isoforms mapped to this entry

View all
EntryEntry nameGene nameLength
A0A0R4IAZ9A0A0R4IAZ9_DANREsec24c1300
A0A8M6Z9C2A0A8M6Z9C2_DANREsec24c1291
A0A8M2B330A0A8M2B330_DANREsec24c1271
A0A8M2B375A0A8M2B375_DANREsec24c1277

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias83-101Polar residues
Compositional bias114-135Polar residues
Compositional bias141-162Polar residues
Compositional bias186-227Pro residues
Compositional bias228-260Polar residues
Compositional bias261-288Pro residues
Compositional bias297-355Pro residues
Compositional bias383-401Polar residues
Compositional bias403-428Pro residues
Compositional bias455-476Pro residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
CU469520
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.
CU694198
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.

Genome annotation databases

Similar Proteins

Disclaimer

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