A0A0P0XCM0 · A0A0P0XCM0_ORYSJ
- ProteinOs08g0187500 protein
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids326 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score1/5
Function
Features
Showing features for dna binding.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
DNA binding | 106-165 | Homeobox | ||||
Sequence: RKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQH |
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | nucleus | |
Molecular Function | DNA binding | |
Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific |
Keywords
- Molecular function
- Biological process
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza sativa
Accessions
- Primary accessionA0A0P0XCM0
Proteomes
Genome annotation databases
Subcellular Location
PTM/Processing
Features
Showing features for modified residue (large scale data).
Type | ID | Position(s) | Source | Description | |||
---|---|---|---|---|---|---|---|
Modified residue (large scale data) | 80 | PTMeXchange | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 95 | PTMeXchange | Phosphoserine | ||||
Sequence: S |
Structure
Family & Domains
Features
Showing features for region, domain, coiled coil, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 81-115 | Disordered | ||||
Sequence: KSCSENVDGAGDGLSGDDQDPNQRPRKKRYHRHTQ | ||||||
Domain | 104-164 | Homeobox | ||||
Sequence: RPRKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQ | ||||||
Coiled coil | 156-190 | |||||
Sequence: NKRTQMKNQHERHENAQLRAENDKLRAENMRYKEA | ||||||
Region | 191-310 | Disordered | ||||
Sequence: LSSASCPNCGGPAALRRAPPPRRERPPPRRDRPHLRHRRQARRQAPHRLLPRPLLPARRRRRPLPSRPRRRLRRRHPRPRHVRRRRRPPPRRAPARRRQAHDRGARRRRHGRARPDGPAR | ||||||
Compositional bias | 219-236 | Basic residues | ||||
Sequence: RRDRPHLRHRRQARRQAP | ||||||
Compositional bias | 243-305 | Basic residues | ||||
Sequence: PLLPARRRRRPLPSRPRRRLRRRHPRPRHVRRRRRPPPRRAPARRRQAHDRGARRRRHGRARP |
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length326
- Mass (Da)37,739
- Last updated2016-01-20 v1
- Checksum083CAC0C6FB662F5
Computationally mapped potential isoform sequences
There is 1 potential isoform mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
Q6ZAR0 | ROC1_ORYSJ | ROC1 | 784 |
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 219-236 | Basic residues | ||||
Sequence: RRDRPHLRHRRQARRQAP | ||||||
Compositional bias | 243-305 | Basic residues | ||||
Sequence: PLLPARRRRRPLPSRPRRRLRRRHPRPRHVRRRRRPPPRRAPARRRQAHDRGARRRRHGRARP |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AP014964 EMBL· GenBank· DDBJ | BAT04139.1 EMBL· GenBank· DDBJ | Genomic DNA |