A0A0P0WPV5 · A0A0P0WPV5_ORYSJ

Function

Features

Showing features for active site.

140850100150200250300350400
TypeIDPosition(s)Description
Active site256

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Molecular Functionpolygalacturonase activity
Biological Processcarbohydrate metabolic process

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Os05g0542800 protein

Gene names

    • ORF names
      OJ1288_A07.4
    • Ordered locus names
      Os05g0542800

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Nipponbare
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza sativa

Accessions

  • Primary accession
    A0A0P0WPV5

Proteomes

Genome annotation databases

Subcellular Location

Secreted, cell wall

Keywords

Family & Domains

Sequence similarities

Belongs to the glycosyl hydrolase 28 family.

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    408
  • Mass (Da)
    43,694
  • Last updated
    2020-02-26 v1
  • Checksum
    DCBDF539C9775EEE
MAILRVSVMRLVVAAMAVAAGVLFFSGAGEARVLLTLDDFGAVGDGITNDTQAFLDAWNAACASTEPAVLAVPAGKTYQIWPVRLAGPCKKKLKLMISGTIAAPASPDEWAGRDPTKWLYVFRVDDLSVSGGGTIDGMGAEWWARSCKRKKTKPCSTVSAPKALQFEECRRVSVQGITMQNGPQFHLMFTRCTDVKASFLRVVAPESSPNTDGIHLNDTTHAQIMDNLISTGDDCVSMVGNCSDVRVKDISCGPGHGISIGSLGKNRTTDRIENVRVDTCLLTNTTNGVRIKSWQGGMGYAHNLRFEGIVMKNVSNPIIIDQYYCDQPTPCANQTQAVEVRKIEFAGIRGTSATEQAIKLACSDAVPCRDLELRNVNLTMVGVVPASCLAKAPHRMLGDATPAARVGS

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AC098833
EMBL· GenBank· DDBJ
AAU43992.1
EMBL· GenBank· DDBJ
Genomic DNA
AP008211
EMBL· GenBank· DDBJ
BAF18112.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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