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A0A0P0HTG3 · A0A0P0HTG3_9PICO

Function

function

Lies on the inner surface of the capsid shell. After binding to the host receptor, the capsid undergoes conformational changes. Capsid protein VP4 is released, capsid protein VP1 N-terminus is externalized, and together, they shape a pore in the host membrane through which the viral genome is translocated into the host cell cytoplasm. After genome has been released, the channel shrinks.

GO annotations

AspectTerm
Cellular Componentcytoplasm
Cellular Componenthost cell cytoplasm
Cellular ComponentT=pseudo3 icosahedral viral capsid
Molecular Functionstructural molecule activity
Biological Processsymbiont entry into host cell
Biological Processvirion attachment to host cell

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Genome polyprotein

Organism names

  • Taxonomic identifier
  • Strain
    • ZZR5
  • Taxonomic lineage
    Viruses > Riboviria > Orthornavirae > Pisuviricota > Pisoniviricetes > Picornavirales > Picornaviridae > Caphthovirinae > Aphthovirus > Foot-and-mouth disease virus

Accessions

  • Primary accession
    A0A0P0HTG3

Subcellular Location

Keywords

PTM/Processing

Keywords

Family & Domains

Features

Showing features for region, domain, compositional bias.

Type
IDPosition(s)Description
Region1-20Disordered
Domain1-84Capsid protein VP4 Picornavirus
Region36-65Disordered
Domain110-273Picornavirus capsid
Domain366-489Picornavirus capsid
Region516-552Disordered
Compositional bias520-535Polar residues

Sequence similarities

Belongs to the picornaviruses polyprotein family.

Family and domain databases

Sequence

  • Sequence status
    Fragment
  • Sequence processing
    The displayed sequence is further processed into a mature form.
  • Length
    978
  • Mass (Da)
    107,749
  • Last updated
    2016-01-20 v1
  • MD5 Checksum
    F97715A71A8A967FF0C0B955EC0366FF
GAGQSSPATGSQNQSGNTGSIINNYYMQQYQNSMDTQLGDNAISGGSNEGSTDTTSTHTNNTQNNDWFSKLAQSAFSGLVGALLADKKTEETTLLEDRILTTSHGTTTSTTQSSVGITYGYADSDRFLPGPNTNGLETRVEQAERFFKHKLFDWTLEQQFGTTHVLELPTDHKGIYGQLVDSHSYIRNGWDVEVSATATQFNGGCLLVAMVPELCKLSEREKYQLTLFPHQFLNPRTNTTAHIQVPYLGVDRHDQGTRHKAWTLVVMVVAPYTNDQTIGSSKAEVYVNIAPTNVYVAGEKPAKQGILPVAVSDGYGGFQNTDPKTSDPVYGHVYNPARTGLPGRFTNLLDVAEACPTLLDFNGVPYVTTQANSGSKVLTCFDLAFGHRNLKNTFMSGLAQYYTQYSGTLNLHFMYTGPTNNKAKYMVAYIPPGTHPLPETPEMASHCYHAEWDTGLNSTFTFTVPYVSAADFAYTYSDEPEQASVQGWVGVYQVTDTHEKDGAVVVSVSAGPDFEFRMPXSPSRQTTSAGEGAEPVTTDASQHGGDRRTTRRHHTDVSFLLDRFTLVGKTQDNRLTLDLLQTKEKALVGAILRAATYYFSDLEVACVGDNKWVGWTPNGAPELAEVGDNPVVFSKGGTTRFALPYTAPHRCLATAYNGDCKYKPTGTAPRENIRGDLATLAARIASETHIPTTFNYGRIYTDTVVDVYVRMKRAELYCPRPVLTHYDHGGKDRYKTAITKPVKQLCNFDLLKLAGDVESNPGPFFFADVRENFTKLVDSINNMQHDMSTKHGPDFNRLVSAFEELTKGVKAIKDGLDEAKPWYKVIKLLSRLSCMAAVAARSKDPVLVAIMLADTGLEILDSTFVVKKISDALSSVFHVPAPVFSFGAPILLAGLVKVASTFFRSTPEDLERAEKQLKARDINDIFAILKNGEWLVKLILAIRDWIKAWISSEEKYISMTDLVPRILECQHNLNDPSK

Features

Showing features for non-terminal residue, compositional bias.

Type
IDPosition(s)Description
Non-terminal residue1
Compositional bias520-535Polar residues
Non-terminal residue978

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
KR108954
EMBL· GenBank· DDBJ
ALJ79265.1
EMBL· GenBank· DDBJ
Viral cRNA

Similar Proteins

Disclaimer

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