A0A0M4V9M5 · A0A0M4V9M5_9METZ

  • Protein
    Transcriptional factor
  • Gene
    EflSoxB1
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Evidence at transcript level
  • Annotation score
    2/5

Function

Features

Showing features for dna binding.

142050100150200250300350400
TypeIDPosition(s)Description
DNA binding87-155HMG box

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specific
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA binding
Biological Processanatomical structure morphogenesis
Biological Processcell differentiation

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Transcriptional factor

Gene names

    • Name
      EflSoxB1

Organism names

  • Taxonomic identifier
  • Organism
  • Taxonomic lineage
    Eukaryota > Metazoa > Porifera > Demospongiae > Heteroscleromorpha > Spongillida > Spongillidae > Ephydatia

Accessions

  • Primary accession
    A0A0M4V9M5

Subcellular Location

Keywords

  • Cellular component

Family & Domains

Features

Showing features for region, compositional bias, domain.

TypeIDPosition(s)Description
Region60-89Disordered
Compositional bias75-89Basic and acidic residues
Domain87-155HMG box

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    420
  • Mass (Da)
    45,510
  • Last updated
    2015-12-09 v1
  • Checksum
    82D75AC2E55D0274
MLEELEVSVLLKKDIPALQTNGEVLCNSYPESVISGRSVLPNLTSVMHLPAMSLSTPPAYSYPLSGVQPPEDRQSPHNSAEDDDDKVKRPMNAFMVWSRKMRKKIADENPKMHNSEISKRLGAQWKALSDEEKRPYIEEAKRLREAHMKKHPNYKYKPKRKKQQPLRRFPMEMAASPYGPYFPQRPTGLPQLATPGVHAGRPLWTGQAAQYAIQRGDSAYGSRYYSASSPPGPYSYGGGYSCLSPTSAAYAASRGGYASGTSQWPGTVNGYHCGSSYGMQDGYQHPMLSYGDTPTFGANGSNPNLPLSFNQCPPHLDTGVSSPSKGVSSPVESVDSCTMLGKDDSVASADSSGENDINSFINVYLDDTTSAVGLEGPESDFKLLASSTSCSDFSSGVMFTSSSETLLDSAGSTVPLQHLI

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias75-89Basic and acidic residues

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AB976525
EMBL· GenBank· DDBJ
BAS50201.1
EMBL· GenBank· DDBJ
mRNA

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.
FeedbackHelp