A0A0J8B9K4 · A0A0J8B9K4_BETVV
- ProteinRNA helicase
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids564 (go to sequence)
- Protein existenceInferred from homology
- Annotation score3/5
Function
Catalytic activity
- ATP + H2O = ADP + H+ + phosphate
Cofactor
Protein has several cofactor binding sites:
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | mitochondrial nucleoid | |
Molecular Function | ATP binding | |
Molecular Function | ATP hydrolysis activity | |
Molecular Function | DNA helicase activity | |
Molecular Function | RNA helicase activity | |
Biological Process | positive regulation of auxin mediated signaling pathway | |
Biological Process | positive regulation of cytokinin-activated signaling pathway | |
Biological Process | positive regulation of gibberellic acid mediated signaling pathway | |
Biological Process | positive regulation of response to salt stress | |
Biological Process | positive regulation of response to water deprivation | |
Biological Process | response to salt stress | |
Biological Process | RNA metabolic process |
Keywords
- Molecular function
- Ligand
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameRNA helicase
- EC number
Gene names
Organism names
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > Caryophyllales > Chenopodiaceae > Betoideae > Beta
Accessions
- Primary accessionA0A0J8B9K4
Proteomes
Genome annotation databases
Subcellular Location
UniProt Annotation
GO Annotation
Keywords
- Cellular component
Interaction
Subunit
Homodimer; in free form. Component of the mitochondrial degradosome (mtEXO) complex which is a heteropentamer containing 2 copies of SUPV3L1 and 3 copies of PNPT1.
Structure
Family & Domains
Features
Showing features for domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 68-184 | Helicase ATP-binding | ||||
Sequence: NARKQQRNVFLHVGPTNSGKTYQALKQLECSSTGVYCGPLRLLAWEVAKRLNKANVPCDLITGQEREEVEGAKHMAVTVEMADVTSHYQCAVIDEIQMLGCRSRGFSFTRALLGLPA | ||||||
Domain | 220-384 | Helicase C-terminal | ||||
Sequence: PLEPLKVSLGSFSNVRKGDCVVTFSRRGIYNFKRKIESEGKHLCSVVYGSLPPETRNRQATMFNDATSESDVLVASDAIGMGLNLNISRIIFSTLKKFDGVELRDLTVPEIKQIAGRAGRYGSKYPVGEVTCLEGEDLPLLHTSLNSPSPPLERAGLFPNYDLLL |
Sequence similarities
Belongs to the helicase family.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length564
- Mass (Da)63,319
- Last updated2015-10-14 v1
- Checksum04E14D0F9E4823AE
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
KQ090301 EMBL· GenBank· DDBJ | KMS97631.1 EMBL· GenBank· DDBJ | Genomic DNA |