A0A0J1FZI7 · A0A0J1FZI7_9FIRM

  • Protein
    Phosphopentomutase
  • Gene
    deoB
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    3/5

Function

function

Isomerase that catalyzes the conversion of deoxy-ribose 1-phosphate (dRib-1-P) and ribose 1-phosphate (Rib-1-P) to deoxy-ribose 5-phosphate (dRib-5-P) and ribose 5-phosphate (Rib-5-P), respectively.

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Catalytic activity

Cofactor

Mn2+ (UniProtKB | Rhea| CHEBI:29035 )

Note: Binds 2 manganese ions.

Pathway

Carbohydrate degradation; 2-deoxy-D-ribose 1-phosphate degradation; D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-alpha-D-ribose 1-phosphate: step 1/2.

Features

Showing features for binding site.

TypeIDPosition(s)Description
Binding site12Mn2+ 1 (UniProtKB | ChEBI)
Binding site283Mn2+ 2 (UniProtKB | ChEBI)
Binding site288Mn2+ 2 (UniProtKB | ChEBI)
Binding site324Mn2+ 1 (UniProtKB | ChEBI)
Binding site325Mn2+ 1 (UniProtKB | ChEBI)
Binding site336Mn2+ 2 (UniProtKB | ChEBI)

GO annotations

AspectTerm
Cellular Componentcytosol
Molecular Functionmagnesium ion binding
Molecular Functionmanganese ion binding
Molecular Functionphosphopentomutase activity
Biological Process2-deoxyribose 1-phosphate catabolic process
Biological Process5-phosphoribose 1-diphosphate biosynthetic process
Biological Processcellular metabolic compound salvage
Biological Processnucleotide metabolic process

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Phosphopentomutase
  • EC number
  • Alternative names
    • Phosphodeoxyribomutase

Gene names

    • Name
      deoB
    • ORF names
      RHS_5476

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • RHS
  • Taxonomic lineage
    Bacteria > Bacillota > Clostridia > Lachnospirales > Lachnospiraceae > Robinsoniella

Accessions

  • Primary accession
    A0A0J1FZI7

Proteomes

Subcellular Location

Keywords

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain4-376Metalloenzyme

Sequence similarities

Belongs to the phosphopentomutase family.

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    391
  • Mass (Da)
    43,523
  • Last updated
    2015-10-14 v1
  • Checksum
    DC2AFBA1C6BC0C08
MKAKRVFLIVLDSFGIGELPDADKFHDTGSNTLRTIRKSGKYFTPNLENLGMFHIEGVEKGKSEVTPTGSYARMAEASMGKDTTIGHWEIAGVISPEPLPVYPNGFPKEIIKRFEEETGRKVICNQPYSGTDVIRDYGKEHVETGALIVYTSADSVFQIAAHEDVVPLKELYHDCEIARKLLCGEHGVGRVIARPFEGTYPDFKRTTNRHDFSLVPPKNTMLDVLSAKGFDTLGIGKIYDIFAGRGIQDTRSIVSNTDGMEKTIELQDRDFHGICFVNLVDFDMLYGHRNDIDGYAKAATDFDKQLGTFLGRMKEDDILIITADHGCDPGTASTDHSREYTPMLIYGNSIKANVSLGTRKTFADIAATVLDLFGIENQVDGESFLREVWKQ

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
JNGB01000141
EMBL· GenBank· DDBJ
KLU68712.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
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