A0A0D7K5C2 · A0A0D7K5C2_9BURK

  • Protein
    Large ribosomal subunit assembly factor BipA
  • Gene
    bipA
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    3/5

Function

function

A 50S ribosomal subunit assembly protein with GTPase activity, required for 50S subunit assembly at low temperatures, may also play a role in translation. Binds GTP and analogs. Binds the 70S ribosome between the 30S and 50S subunits, in a similar position as ribosome-bound EF-G; it contacts a number of ribosomal proteins, both rRNAs and the A-site tRNA.

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Catalytic activity

Features

Showing features for binding site.

160750100150200250300350400450500550600
TypeIDPosition(s)Description
Binding site15-20GTP (UniProtKB | ChEBI)
Binding site128-131GTP (UniProtKB | ChEBI)

GO annotations

AspectTerm
Cellular Componentcytosol
Cellular Componentribonucleoprotein complex
Molecular FunctionGTP binding
Molecular FunctionGTPase activity
Molecular Functionguanosine tetraphosphate binding
Molecular Functionribosome binding
Molecular FunctionrRNA binding
Molecular FunctiontRNA binding
Biological Processribosomal large subunit assembly

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Large ribosomal subunit assembly factor BipA
  • EC number
  • Alternative names
    • GTP-binding protein BipA

Gene names

    • Name
      bipA
    • ORF names
      RP29_16225

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • KY4
  • Taxonomic lineage
    Bacteria > Pseudomonadota > Betaproteobacteria > Burkholderiales > Comamonadaceae > Acidovorax

Accessions

  • Primary accession
    A0A0D7K5C2

Proteomes

Subcellular Location

Cytoplasm
Note: Binds to ribosomes.

Keywords

Interaction

Subunit

Monomer.

Protein-protein interaction databases

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain3-206Tr-type G

Sequence similarities

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    607
  • Mass (Da)
    66,458
  • Last updated
    2015-05-27 v1
  • Checksum
    02512EE85B0C3D39
MTKQIRNIAIIAHVDHGKTTMVDQLLRQSGTFADHEKVVDTVMDNNAIEKERGITILAKNCAVSWKGTHINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPIVVVNKVDKPGAAPDKVINAAFDLFDKLGATDEQLDFPVVYASGINGWSSLEEGAPGEQWGADMSALFNTILKHVPPNSGDPKAPLQLQISALDFSTFVGRIGVGRVSQGTIKPGMDVLVMEGPDGNSVKGRVNQVLTFQGLDRVQVTEAGPGNIVLINGIADIGIGVTVTDPANPAPLPMLKVDEPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQKELQHNVALRVKETDEDGIFEVAGRGELHLTILLENMRREGYELAVSKPRVVFKDIDGVRHEPIELVTADIEEGHQGGVMQALGERKGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLISNIFDGYEPHKGDIGGRKNGVLISMDDGEIFTYALGKLDDRGRMFVKANDPVYEGMIVGIHSRDNDLVVNATRTKQLTNFRVSGKEDAIKITPPIDLTLEYGVEFIEDDELVEITPKSVRLRKRYLTENERKRASRS

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
JXYQ01000060
EMBL· GenBank· DDBJ
KJA09510.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.
FeedbackHelp