A0A0D3LXD4 · A0A0D3LXD4_PHYCP

Function

function

Pectinolytic enzymes consist of four classes of enzymes: pectin lyase, polygalacturonase, pectin methylesterase and rhamnogalacturonase. Among pectinolytic enzymes, pectin lyase is the most important in depolymerization of pectin, since it cleaves internal glycosidic bonds of highly methylated pectins.

Catalytic activity

  • Eliminative cleavage of (1->4)-alpha-D-galacturonan methyl ester to give oligosaccharides with 4-deoxy-6-O-methyl-alpha-D-galact-4-enuronosyl groups at their non-reducing ends.
    EC:4.2.2.10 (UniProtKB | ENZYME | Rhea)

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Molecular Functionpectate lyase activity

Keywords

  • Molecular function
    • #Lyase

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    pectin lyase
  • EC number

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • YN07
  • Taxonomic lineage
    Eukaryota > Sar > Stramenopiles > Oomycota > Peronosporales > Peronosporaceae > Phytophthora

Accessions

  • Primary accession
    A0A0D3LXD4

Organism-specific databases

Phenotypes & Variants

Miscellaneous

PTM/Processing

Features

Showing features for signal, chain.

TypeIDPosition(s)Description
Signal1-21
ChainPRO_500226499022-410pectin lyase

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain100-321Pectate lyase

Keywords

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    410
  • Mass (Da)
    43,873
  • Last updated
    2015-05-27 v1
  • Checksum
    D094A6A578BADC8C
MARLQFLFAAAVALVAQSATAITIGSPSGLATGTTGGGDAAPVYPKTTKELVALLRDPAPQVVILNTTFDFRTLEGNTTAEGCRPDYMRKCIELNNGFKSQDVILQDGGMSNTGGCTNGVSVNVTYDNAPFNRLNVRSNKTIRGVGQSGVIMGKGLALNGDNIIVQNIHITEINPHLVWGGDAITIQGLTDGTVPLEHIWLDHIKISRIGRQFIAVDKAGASTMTISNSDFDGHTEFSKTCDGHHYWSFLLYGRYTGISMVNNYIHYLSGRLPKVGGTADSNVVTHIANNFYKDNSYHSMEIGTNAYVLAEGNYFVNTTKPLYDGDDPDVPGMTDGSIYAPLESSEDECKAQLGRPCVANVLEGSGPFGSRNGTTALAKVKPHPTIARHAPKQAQQLKLSTGNFGVGDLE

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
KF133976
EMBL· GenBank· DDBJ
AHX74066.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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