A0A0C1YMQ5 · A0A0C1YMQ5_9CYAN
- ProteinRibonuclease Z
- Genernz
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids318 (go to sequence)
- Protein existenceInferred from homology
- Annotation score2/5
Function
function
Zinc phosphodiesterase, which displays some tRNA 3'-processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA.
Catalytic activity
Cofactor
Note: Binds 2 Zn2+ ions.
Features
Showing features for binding site, active site.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Binding site | 62 | Zn2+ 1 (UniProtKB | ChEBI); catalytic | |||
Binding site | 64 | Zn2+ 1 (UniProtKB | ChEBI); catalytic | |||
Active site | 66 | Proton acceptor | |||
Binding site | 66 | Zn2+ 2 (UniProtKB | ChEBI); catalytic | |||
Binding site | 67 | Zn2+ 2 (UniProtKB | ChEBI); catalytic | |||
Binding site | 140 | Zn2+ 1 (UniProtKB | ChEBI); catalytic | |||
Binding site | 211 | Zn2+ 1 (UniProtKB | ChEBI); catalytic | |||
Binding site | 211 | Zn2+ 2 (UniProtKB | ChEBI); catalytic | |||
Binding site | 269 | Zn2+ 2 (UniProtKB | ChEBI); catalytic | |||
GO annotations
Aspect | Term | |
---|---|---|
Molecular Function | 3'-tRNA processing endoribonuclease activity | |
Molecular Function | zinc ion binding |
Keywords
- Molecular function
- Biological process
- Ligand
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameRibonuclease Z
- EC number
- Short namesRNase Z
- Alternative names
Gene names
Organism names
- Organism
- Strain
- Taxonomic lineageBacteria > Cyanobacteriota > Cyanophyceae > Oscillatoriophycideae > Oscillatoriales > Oscillatoriaceae > Lyngbya
Accessions
- Primary accessionA0A0C1YMQ5
Proteomes
Interaction
Subunit
Homodimer.
Structure
Sequence
- Sequence statusComplete
- Length318
- Mass (Da)35,277
- Last updated2015-04-01 v1
- MD5 Checksum50D134481A7A38BFA039152FB6D82497
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
JTHE02000003 EMBL· GenBank· DDBJ | NEV69975.1 EMBL· GenBank· DDBJ | Genomic DNA |