A0A0A0WC11 · A0A0A0WC11_ALTSO

  • Protein
    DNA-directed RNA polymerase
  • Gene
    RPB2
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    2/5

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular ComponentDNA-directed RNA polymerase complex
Molecular FunctionDNA binding
Molecular FunctionDNA-directed 5'-3' RNA polymerase activity
Molecular Functionribonucleoside binding
Biological ProcessDNA-templated transcription

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    DNA-directed RNA polymerase
  • EC number

Gene names

    • Name
      RPB2

Organism names

  • Taxonomic identifier
  • Organism
  • Strains
    • CBS 106.21
    • CBS 109157
    • CBS 109158
    • CBS 111.41
    • CBS 111.44
    • CBS 116442
  • Taxonomic lineage
    Eukaryota > Fungi > Dikarya > Ascomycota > Pezizomycotina > Dothideomycetes > Pleosporomycetidae > Pleosporales > Pleosporineae > Pleosporaceae > Alternaria > Alternaria sect. Porri

Accessions

  • Primary accession
    A0A0A0WC11

Subcellular Location

Keywords

Family & Domains

Features

Showing features for domain, region.

TypeIDPosition(s)Description
Domain1-53RNA polymerase Rpb2
Domain88-149RNA polymerase Rpb2
Domain195-239RNA polymerase Rpb2
Region232-257Disordered

Sequence similarities

Belongs to the RNA polymerase beta chain family.

Family and domain databases

Sequence

  • Sequence status
    Fragment
  • Length
    257
  • Mass (Da)
    29,536
  • Last updated
    2015-02-04 v1
  • Checksum
    FCF4793BD6416475
SHLRRTNTPVGRDGKLAKPRQLHNSHWGLVCPAETPEGQACGLVKNLSLMCYVSVGSDASPIIDFMTQRNMQLLEEYDQNQNPDATKVFVNGVWVGVHSNAQQLVTVVQELRRNGTLSYEMSLIRDIRDREFKIFTDAGRVMRPLFVVENDIRKPNRNHLIFTKEISNKLKQEQQETSTRQGWSQDEIDSATYGWRGLIQDGVVEYLDAEEEETAMITFSPEDLEEWREMKMGLPAAERSTEGEHRLRRLKPLPDPR

Features

Showing features for non-terminal residue.

TypeIDPosition(s)Description
Non-terminal residue1
Non-terminal residue257

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
KJ718410
EMBL· GenBank· DDBJ
AIW81861.1
EMBL· GenBank· DDBJ
Genomic DNA
KJ718411
EMBL· GenBank· DDBJ
AIW81862.1
EMBL· GenBank· DDBJ
Genomic DNA
KJ718412
EMBL· GenBank· DDBJ
AIW81863.1
EMBL· GenBank· DDBJ
Genomic DNA
KJ718413
EMBL· GenBank· DDBJ
AIW81864.1
EMBL· GenBank· DDBJ
Genomic DNA
KJ718414
EMBL· GenBank· DDBJ
AIW81865.1
EMBL· GenBank· DDBJ
Genomic DNA
KJ718415
EMBL· GenBank· DDBJ
AIW81866.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.
FeedbackHelp