A0A093WEQ5 · A0A093WEQ5_9PROT

  • Protein
    Large ribosomal subunit assembly factor BipA
  • Gene
    bipA
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    3/5

Function

function

A 50S ribosomal subunit assembly protein with GTPase activity, required for 50S subunit assembly at low temperatures, may also play a role in translation. Binds GTP and analogs. Binds the 70S ribosome between the 30S and 50S subunits, in a similar position as ribosome-bound EF-G; it contacts a number of ribosomal proteins, both rRNAs and the A-site tRNA.

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Catalytic activity

Features

Showing features for binding site.

160350100150200250300350400450500550600
TypeIDPosition(s)Description
Binding site15-20GTP (UniProtKB | ChEBI)
Binding site128-131GTP (UniProtKB | ChEBI)

GO annotations

AspectTerm
Cellular Componentcytosol
Cellular Componentribonucleoprotein complex
Molecular FunctionGTP binding
Molecular FunctionGTPase activity
Molecular Functionguanosine tetraphosphate binding
Molecular Functionribosome binding
Molecular FunctionrRNA binding
Molecular FunctiontRNA binding
Biological Processribosomal large subunit assembly
Biological Processtranslation

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Large ribosomal subunit assembly factor BipA
  • EC number
  • Alternative names
    • GTP-binding protein BipA

Gene names

    • Name
      bipA
    • ORF names
      FF85_00040

Organism names

  • Taxonomic identifier
  • Strain
    • Qinghai
  • Taxonomic lineage
    Bacteria > Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae

Accessions

  • Primary accession
    A0A093WEQ5

Proteomes

Subcellular Location

Cytoplasm
Note: Binds to ribosomes.

Keywords

Interaction

Subunit

Monomer.

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain3-198Tr-type G

Sequence similarities

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    603
  • Mass (Da)
    67,005
  • Last updated
    2014-11-26 v1
  • Checksum
    B7A7A1D9D802357E
MELKLRNIAIIAHVDHGKTTLLDNIMKQSGMFRENELVAERLMDSGDLEKERGITILAKPTSVKWKDVRMNIIDTPGHADFGGEVERVLGMTDGVILLVDAAEGPMPQTKFVLGKALKQGLRPIVIINKIDRSDARPKEVIDEVFDLFVSLDASDAQLDFPILYASGRAGWCVKELEEPRENLHPLLNLILSYVSEPKVDQNRPFAMLVTLLSSDSYLGRCLVGRVIHGSAKINDTVKAINLKGEQVDMGRLTKLFTFAGTERIIADKVTAGDIVCIAGLSDASVADTICDMSVNEPLKSTPIDPPTMSVTITVNDSPFAGKDGKKVTSTVIRERLMKEAESNVAITFKENEGKDSFEIGGRGELQIGVLIETMRREGFELTVSRPRVLYKTENGQKLEPMEEVTIDVDEEYSSSVIDNMNQRKAEMTDMKDTGAGKKRIIFKAPSRGLIGYQSRFLTDTKGTGVLNRIFHSYGPFKGEIVGRRNGALISIDTGQAVAFAIWKLQDRGRMFVSHNTDVYQGMIVGEHSRENDLVINVMKGKQLTNMRASGSDEAVALVPPVVMNLEELMSYINEDELLEVTPRHLRLRKKFLLEHERKRASKS

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
JPLS01000001
EMBL· GenBank· DDBJ
KFX72272.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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