A0A078F0X0 · A0A078F0X0_BRANA

  • Protein
    RING-type E3 ubiquitin transferase
  • Gene
    BnaA06g16210D
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Predicted
  • Annotation score
    3/5

Function

function

Functions as an E3 ubiquitin ligase.

Catalytic activity

  • S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N6-ubiquitinyl-[acceptor protein]-L-lysine.
    EC:2.3.2.27 (UniProtKB | ENZYME | Rhea)

Pathway

Protein modification; protein ubiquitination.

Features

Showing features for binding site.

1803100200300400500600700800
TypeIDPosition(s)Description
Binding site487ATP (UniProtKB | ChEBI)

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Molecular FunctionATP binding
Molecular Functionprotein kinase activity
Molecular Functionubiquitin-protein transferase activity
Biological Processprotein phosphorylation
Biological Processprotein ubiquitination

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    RING-type E3 ubiquitin transferase
  • EC number

Gene names

    • Name
      BnaA06g16210D
    • ORF names
      DARMORV10_A06P18690.1
      , GSBRNA2T00125380001

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • cv. Darmor-bzh
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Brassiceae > Brassica

Accessions

  • Primary accession
    A0A078F0X0

Proteomes

Genome annotation databases

PTM/Processing

Proteomic databases

Interaction

Protein-protein interaction databases

Family & Domains

Features

Showing features for compositional bias, region, coiled coil, domain.

Type
IDPosition(s)Description
Compositional bias179-195Polar residues
Region179-205Disordered
Compositional bias225-240Basic and acidic residues
Region225-289Disordered
Coiled coil335-362
Coiled coil405-432
Domain460-713Protein kinase
Domain732-803U-box

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    803
  • Mass (Da)
    91,024
  • Last updated
    2014-10-29 v1
  • Checksum
    58637DF220C5834B
MGSIGGDELGLDVDETIFVAVAEDVERSKTTLLWAARNFSGKKICLLYVHRPARPASWTHKKLAGGTFRKHAVKVIERVDKQKVDELMDSYLRLLSKTEVQTDKLCIAGQNIEEGIVDLIARHNIKWFVMGAASDKHYSWRMTDLKSKKAIFVCKNAPDFCHIWFLCKGYLIFTRTTNDDTSNTQTMPPLVQLDSDTETRRSEKLESSYMRRRLRYWRSLLEQDGEKDTGQLEREKVEPSPTTHSSSGSGSSFGEPVGPEPASPDLVGSDTLTPSNVQERKREGNVAREVHRYDKAMHDISQSERTVYGEARNGWKEDDSTMEALCKAKALDGLCSKELSRRKKLEELLEKEKDEVKTVIEQNNGFMRKLQIVQGDNLRLESQITKLQDLEKEHGEKFDTAMELLKSFRQKRDEIRIDHENAIKEVNALKRLIKGKSVESSGSEMLDYSFMEINEATNEFDPSWKLGEGKYGSVYKGNLQNLQVAVKMLPSYGSQNHFEFERKVEILSRLRHPHLVTIMGTCPESRSVIYQYVPNGSLEDCFSSANNVPALPWESRIRIASEICSALLFLHSNVPCIIHGNLKPSKILLDSNLVTKISDYGISQLIPVNGIDKSDPHVDPHYFVSGEMTLESDVYSFGMILLQLLTRRPLSGVLRDVKCAVENDNISAVLDNSGGDWPIARGKKLANIAIRCCKRNPLNRPDLAVVLRNIDRMKAPLSEQSSYSSNQKPPRKPPSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALHLAIQDWHNQW

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias179-195Polar residues
Compositional bias225-240Basic and acidic residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
HG994360
EMBL· GenBank· DDBJ
CAF2085052.1
EMBL· GenBank· DDBJ
Genomic DNA
LK031983
EMBL· GenBank· DDBJ
CDY08105.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

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