A0A068UQE0 · A0A068UQE0_COFCA

Function

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular ComponentRNA polymerase II, core complex
Cellular ComponentRNA polymerase IV complex
Molecular FunctionDNA binding
Molecular Functionmetal ion binding
Molecular FunctionRNA polymerase II activity
Biological ProcesssiRNA processing
Biological ProcesssiRNA-mediated long-distance post-transcriptional gene silencing

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    DNA-directed RNA polymerase
  • EC number

Gene names

    • ORF names
      GSCOC_T00030289001

Organism names

  • Taxonomic identifier
  • Strain
    • cv. DH200-94
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > asterids > lamiids > Gentianales > Rubiaceae > Ixoroideae > Gardenieae complex > Bertiereae - Coffeeae clade > Coffeeae > Coffea

Accessions

  • Primary accession
    A0A068UQE0

Proteomes

Genome annotation databases

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for signal, chain.

Type
IDPosition(s)Description
Signal1-15
ChainPRO_501231686316-1511DNA-directed RNA polymerase

Interaction

Protein-protein interaction databases

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain262-543RNA polymerase N-terminal

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    1,511
  • Mass (Da)
    167,830
  • Last updated
    2014-10-01 v1
  • MD5 Checksum
    5C38C60B2172A380D00FFC13BD81F566
MICLLPFFFLEISFSACLIYESTRLLRPNLSISELNMDRATIDIEHSEKLEQKGRLMSISFNILSEADAVRKSVKLIGAASEVTDPALGFPNLINHCNTCGAKDRRECEGHFGLINFPFTILNPYFLPEVAQILNKICPACKSVRVNKVKSSGSTSVRDHSDTCKYCDGRSRDSYPPMKFKVTSKDVFAKTAISAEVSERSSSNRSSNGSMASDYWDIIPSDAQQDLSNLGSNKRLLSHAQVYNILKDVDPRFLESFLKRKSSVFLNCFLLTPNCHRVTELGQHITFDTKTKLYKKLIDFRGTANELSARVLDLIKVSKVRSEKSSAINSAFSVLGFKDSAVATSGLKYIKELLLGKRTDHAFRMVVVGDPNINLGEIGMPRHIAEKLLVSEHVNKWNFGKLKDYVALILVGGGEICVRRGGRLEKLSIIDKLCCGDVLYRPMLDGDIVLINRPPSIHQHSMLSLSVRILPINSVLSINPLICSPLRGDFDGDCLHGYVSQSVDSRVELNELVALNKQLLNGQSGRNLLSLSHDSLTAAHLILEDGVTLDKFQMQQLQMFCSCPMPIPAITKAPGNKCFWTGKQLFSLLIPPCFDYVSQSNGVQISKGEIVTSSSGSSWLRDNDGNLFHSLVRCCKNEVLGFLCAAQEVLCEWLAMRGLSVSLSDLYLTSDAYSRQNMIEEVSCGLQEAELLSSIRLLMMGSNQDFLVESTEANKRSVDFGEQHLSSIQQQNSSVLSEASVSAFKQVFLDVQHLVYHYVSKDNSFLSMLMAGSKGNLLKLVQHSMCLGLQHSVVPLSFSIPHQLSCATWNYHKISVHESHGTLDHSGSYIPFAVIENSFLTGLNPMECFVHSLTTRDSSFSGHADVSGTLTRKLMFFMRDLSIGYDGTVRNSYGNQLIQFSYNSRDTLTPCNCNDESPSETISAYDVGGHPVGALAACAISEAAYSALDLPISALESSPLLNLKKILDCGVKKSSGDKTASIFLCKKLGRQTYGLEYGALEVKDHLERLMLEDVVSSSMISYSKEKCSRSQISPWICHFHISKEIIKRKRLRVQSIIDALNMAWRSAKVKLKINLPDLQITGKACSLALKQNEKDTKICLTVSILEKSKKSSLRLDILRNMVMPFLLGTVIKGFPEFKKVDIMWKDCRNSSKSSKGSLGGVYLRVFMSEKCDRTKFWSVLVDNCLRIRDLIDWERSHPDDIHDMAPAYGIDAAVNHFLSSLNSAISDTGKTILPEHLVLTADCLSATGEFVALNAKGLAQQRKETAVSSPFLQACFSSPGDCFVRAAKTGIVDNLQGTVDALAWGMVPSIGTGARFDIIYSGKGHEPAKSIDVYDLLGSIVNLNQQVKFPNKDYEMSGKSIVQHLFAYDDLATKGCILPRTLLRNFFSLKDIQKLSHSLKHMLNKYDVDCQLSEIDKTIVMAALSFHPRSSEKIGIGAHEIKVGYHSEYDNSRCFVLVRKDGTVADFSYHKCVHNALQLIAPDWAKKYESKWLNGPKANSRVWPMGHRCRK

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
HG739125
EMBL· GenBank· DDBJ
CDP09818.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

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