A0A068CM48 · A0A068CM48_ARAHA
- ProteinAt4g21430p-like protein
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids940 (go to sequence)
- Protein existenceInferred from homology
- Annotation score2/5
Function
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | chromatin | |
Cellular Component | histone deacetylase complex | |
Molecular Function | chromatin DNA binding | |
Molecular Function | histone H3K9 demethylase activity | |
Molecular Function | transcription coregulator activity | |
Biological Process | regulation of transcription by RNA polymerase II |
Keywords
- Ligand
Names & Taxonomy
Protein names
- Submitted names
Organism names
- Organism
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionA0A068CM48
Subcellular Location
UniProt Annotation
GO Annotation
Structure
Family & Domains
Features
Showing features for domain, region, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 7-53 | WRC | ||||
Sequence: VPDEFRCNRSDGKQWRCKRRALEGKKMCEAHHSQQSLKRSKQKVPES | ||||||
Region | 33-73 | Disordered | ||||
Sequence: MCEAHHSQQSLKRSKQKVPESSKLLRSRRGGDEAASSEIKP | ||||||
Compositional bias | 48-68 | Basic and acidic residues | ||||
Sequence: QKVPESSKLLRSRRGGDEAAS | ||||||
Domain | 229-275 | RING-type | ||||
Sequence: CHWCGTRGFGDLISCLSCEREFFCIDCIEKRNKGSKEEVEKKCPVCR | ||||||
Domain | 602-894 | JmjC | ||||
Sequence: FPNHYAEILNILPISHYMDPKRGLLNIAASLPDTVQTPDFGPCLNISYRSGEEFAHPAHPDSVKKLGFETCDMVDILLYVTETPVSTKQICRIRKLMKNIGRVRSKNPEKGRESRFDKGKKRDRSEAYAQRDWLDDYPSSDSESPQHCLGAKCRGSEFEGEERESCNDSCEEESLSNSYGAQWDVFQKQDVYKLLEYIKNHSLELEPMDSGKKEVSHPLLEQSYYLDEYHKARLKEEFDIEPWSFDQCVGEAVIVPAGCPYQNRKNKSCVNAVLKFLSPEHVSESIKRVEELN | ||||||
Compositional bias | 703-732 | Basic and acidic residues | ||||
Sequence: RVRSKNPEKGRESRFDKGKKRDRSEAYAQR | ||||||
Region | 703-749 | Disordered | ||||
Sequence: RVRSKNPEKGRESRFDKGKKRDRSEAYAQRDWLDDYPSSDSESPQHC |
Sequence similarities
Belongs to the JARID1 histone demethylase family.
Keywords
- Domain
Family and domain databases
Sequence
- Sequence statusComplete
- Length940
- Mass (Da)106,686
- Last updated2014-10-01 v1
- Checksum0E729F93D5305E7D
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 48-68 | Basic and acidic residues | ||||
Sequence: QKVPESSKLLRSRRGGDEAAS | ||||||
Compositional bias | 703-732 | Basic and acidic residues | ||||
Sequence: RVRSKNPEKGRESRFDKGKKRDRSEAYAQR |