A0A066RD15 · A0A066RD15_ECOLX

  • Protein
    Quinate/shikimate dehydrogenase
  • Gene
    ydiB
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    3/5

Function

function

The actual biological function of YdiB remains unclear, nor is it known whether 3-dehydroshikimate or quinate represents the natural substrate. Catalyzes the reversible NAD-dependent reduction of both 3-dehydroshikimate (DHSA) and 3-dehydroquinate to yield shikimate (SA) and quinate, respectively. It can use both NAD or NADP for catalysis, however it has higher catalytic efficiency with NAD.

Catalytic activity

Pathway

Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 4/7.

Features

Showing features for binding site.

TypeIDPosition(s)Description
Binding site71substrate
Binding site107substrate
Binding site132-135NAD+ (UniProtKB | ChEBI)
Binding site155-158NAD+ (UniProtKB | ChEBI)
Binding site205NAD+ (UniProtKB | ChEBI)
Binding site232-235NAD+ (UniProtKB | ChEBI)
Binding site255NAD+ (UniProtKB | ChEBI)

GO annotations

AspectTerm
Molecular Functionquinate 3-dehydrogenase (NAD+) activity
Molecular Functionquinate 3-dehydrogenase (NADP+) activity
Molecular Functionshikimate 3-dehydrogenase (NAD+) activity
Molecular Functionshikimate 3-dehydrogenase (NADP+) activity
Biological Processamino acid biosynthetic process
Biological Processaromatic amino acid family biosynthetic process
Biological Processchorismate biosynthetic process
Biological Processshikimate metabolic process

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Quinate/shikimate dehydrogenase
  • EC number
  • Alternative names
    • NAD-dependent shikimate 5-dehydrogenase

Gene names

    • Name
      ydiB
    • Synonyms
      ydiB_1
    • ORF names
      ABE91_028605
      , BANRA_02328
      , BG944_000191
      , BGZ_01956
      , BK300_17740
      , BMT50_22995
      , BRV02_001487
      , BTQ06_20495
      , C1Q91_000541
      , C6669_20740
      , C7B02_06135
      , C9160_06470
      , C9194_02150
      , CF22_000747
      , CG704_08920
      , CQ842_05505
      , CQ842_22750
      , DIV22_01760
      , E2863_02072
      , E5H86_01780
      , EN85_001596
      , GAI89_08145
      , GAJ12_14950
      , GNZ05_11285
      , GP965_24565
      , GP979_19310
      , GQE86_25965
      , GQN24_07475
      , GRW05_29325
      , GRW24_22340
      , GUC01_11710
      , HHH44_000883
      , HKA49_000276
      , HV209_07975
      , I6H02_01900
      , J5U05_000764
      , J8F57_001093
      , NCTC10418_03554
      , NCTC11181_05177
      , NCTC8009_04559
      , NCTC8333_02802
      , NCTC8960_05138
      , NCTC8985_00912
      , NY836_14460
      , OFN31_03800

Organism names

  • Taxonomic identifier
  • Organism
  • Strains
    • 453
    • 574
    • 1199
    • 34870
    • 188143
  • Taxonomic lineage
    Bacteria > Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia

Accessions

  • Primary accession
    A0A066RD15

Proteomes

Interaction

Subunit

Homodimer.

Protein-protein interaction databases

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain12-94Shikimate dehydrogenase substrate binding N-terminal
Domain255-284SDH C-terminal

Sequence similarities

Belongs to the shikimate dehydrogenase family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    288
  • Mass (Da)
    31,242
  • Last updated
    2014-09-03 v1
  • MD5 Checksum
    575CEB3057EE9821B3BC1A24CE600033
MDVTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNDSFPGAIEGLKALKMRGTGISMPNKQLACEYVDELTPAAKLVGAINTIVNDDGYLRGYNTDGTGHIRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVMGFGA

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
CP024092
EMBL· GenBank· DDBJ
ATP26193.1
EMBL· GenBank· DDBJ
Genomic DNA
CP031134
EMBL· GenBank· DDBJ
AXG19252.1
EMBL· GenBank· DDBJ
Genomic DNA
AP018802
EMBL· GenBank· DDBJ
BBF53566.1
EMBL· GenBank· DDBJ
Genomic DNA
AASCJS010000002
EMBL· GenBank· DDBJ
EFA9844229.1
EMBL· GenBank· DDBJ
Genomic DNA
AASEPP010000002
EMBL· GenBank· DDBJ
EFC2244555.1
EMBL· GenBank· DDBJ
Genomic DNA
AASSGK010000006
EMBL· GenBank· DDBJ
EFG2160444.1
EMBL· GenBank· DDBJ
Genomic DNA
AASWKH010000006
EMBL· GenBank· DDBJ
EFH6094624.1
EMBL· GenBank· DDBJ
Genomic DNA
AASWKX010000017
EMBL· GenBank· DDBJ
EFH6166336.1
EMBL· GenBank· DDBJ
Genomic DNA
AASXRC010000001
EMBL· GenBank· DDBJ
EFI0211108.1
EMBL· GenBank· DDBJ
Genomic DNA
AATJKW010000008
EMBL· GenBank· DDBJ
EFL9836636.1
EMBL· GenBank· DDBJ
Genomic DNA
AATJQG010000002
EMBL· GenBank· DDBJ
EFM0514805.1
EMBL· GenBank· DDBJ
Genomic DNA
DABALL010000004
EMBL· GenBank· DDBJ
HAH1417529.1
EMBL· GenBank· DDBJ
Genomic DNA
DABFUC010000001
EMBL· GenBank· DDBJ
HAI8956189.1
EMBL· GenBank· DDBJ
Genomic DNA
DADPIR010000006
EMBL· GenBank· DDBJ
HAZ7490916.1
EMBL· GenBank· DDBJ
Genomic DNA
DADRWU010000005
EMBL· GenBank· DDBJ
HBA4245718.1
EMBL· GenBank· DDBJ
Genomic DNA
JABXPW010000002
EMBL· GenBank· DDBJ
MBA7718543.1
EMBL· GenBank· DDBJ
Genomic DNA
JACCJF010000003
EMBL· GenBank· DDBJ
MBZ4692503.1
EMBL· GenBank· DDBJ
Genomic DNA
JAOVKC010000003
EMBL· GenBank· DDBJ
MCV5620903.1
EMBL· GenBank· DDBJ
Genomic DNA
JANWOR010000377
EMBL· GenBank· DDBJ
MDA4178584.1
EMBL· GenBank· DDBJ
Genomic DNA
WOET01000007
EMBL· GenBank· DDBJ
MUM72740.1
EMBL· GenBank· DDBJ
Genomic DNA
WSXK01000160
EMBL· GenBank· DDBJ
MWF98412.1
EMBL· GenBank· DDBJ
Genomic DNA
WTOM01000005
EMBL· GenBank· DDBJ
MWN84904.1
EMBL· GenBank· DDBJ
Genomic DNA
WTQQ01000427
EMBL· GenBank· DDBJ
MWR90420.1
EMBL· GenBank· DDBJ
Genomic DNA
WTRC01000673
EMBL· GenBank· DDBJ
MWT24055.1
EMBL· GenBank· DDBJ
Genomic DNA
WUIY01000640
EMBL· GenBank· DDBJ
MXI78270.1
EMBL· GenBank· DDBJ
Genomic DNA
WUIG01000715
EMBL· GenBank· DDBJ
MXJ11173.1
EMBL· GenBank· DDBJ
Genomic DNA
WXKQ01000007
EMBL· GenBank· DDBJ
NAG19683.1
EMBL· GenBank· DDBJ
Genomic DNA
MOHC01000033
EMBL· GenBank· DDBJ
OJN36327.1
EMBL· GenBank· DDBJ
Genomic DNA
MPGR01000001
EMBL· GenBank· DDBJ
OKB75425.1
EMBL· GenBank· DDBJ
Genomic DNA
NNAF01000016
EMBL· GenBank· DDBJ
OZO79245.1
EMBL· GenBank· DDBJ
Genomic DNA
MRVZ01000078
EMBL· GenBank· DDBJ
PAU19144.1
EMBL· GenBank· DDBJ
Genomic DNA
LDXE02000009
EMBL· GenBank· DDBJ
PBN67686.1
EMBL· GenBank· DDBJ
Genomic DNA
PYRA01000004
EMBL· GenBank· DDBJ
PSY95895.1
EMBL· GenBank· DDBJ
Genomic DNA
QFSS01000009
EMBL· GenBank· DDBJ
PZZ74309.1
EMBL· GenBank· DDBJ
Genomic DNA
CP065611
EMBL· GenBank· DDBJ
QPR05267.1
EMBL· GenBank· DDBJ
Genomic DNA
UARW01000010
EMBL· GenBank· DDBJ
SQD04052.1
EMBL· GenBank· DDBJ
Genomic DNA
UFYN01000008
EMBL· GenBank· DDBJ
STE76115.1
EMBL· GenBank· DDBJ
Genomic DNA
UFZQ01000001
EMBL· GenBank· DDBJ
STE85929.1
EMBL· GenBank· DDBJ
Genomic DNA
UGCO01000001
EMBL· GenBank· DDBJ
STI75680.1
EMBL· GenBank· DDBJ
Genomic DNA
UGFE01000002
EMBL· GenBank· DDBJ
STM23847.1
EMBL· GenBank· DDBJ
Genomic DNA
UGFO01000006
EMBL· GenBank· DDBJ
STN14741.1
EMBL· GenBank· DDBJ
Genomic DNA
RROO01000003
EMBL· GenBank· DDBJ
TJF71908.1
EMBL· GenBank· DDBJ
Genomic DNA
RRNI01000005
EMBL· GenBank· DDBJ
TJH23678.1
EMBL· GenBank· DDBJ
Genomic DNA
UWXJ01000001
EMBL· GenBank· DDBJ
VCY83666.1
EMBL· GenBank· DDBJ
Genomic DNA
CABWJN010000003
EMBL· GenBank· DDBJ
VWN06123.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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