UniProtKB - Q14160 (SCRIB_HUMAN)
Protein scribble homolog
SCRIB
Functioni
GO - Molecular functioni
- cadherin binding Source: BHF-UCL
GO - Biological processi
- activation of GTPase activity Source: UniProtKB
- apoptotic process involved in morphogenesis Source: UniProtKB
- cell-cell adhesion Source: UniProtKB
- cell migration Source: UniProtKB
- cell population proliferation Source: UniProtKB
- establishment of apical/basal cell polarity Source: UniProtKB
- establishment of T cell polarity Source: UniProtKB
- establishment or maintenance of epithelial cell apical/basal polarity Source: GO_Central
- mammary gland duct morphogenesis Source: UniProtKB
- mitigation of host immune response by virus Source: UniProtKB-KW
- negative regulation of activated T cell proliferation Source: UniProtKB
- negative regulation of mitotic cell cycle Source: UniProtKB
- neural tube closure Source: UniProtKB
- neurotransmitter receptor transport, endosome to postsynaptic membrane Source: GO_Central
- neurotransmitter receptor transport postsynaptic membrane to endosome Source: GO_Central
- polarized epithelial cell differentiation Source: UniProtKB
- positive chemotaxis Source: UniProtKB
- positive regulation of apoptotic process Source: UniProtKB
- positive regulation of interferon-gamma production Source: UniProtKB
- positive regulation of receptor recycling Source: UniProtKB
- protein localization to adherens junction Source: BHF-UCL
- receptor clustering Source: GO_Central
- receptor localization to synapse Source: GO_Central
- suppression by virus of host STAT1 activity Source: UniProtKB-KW
- suppression by virus of host STAT2 activity Source: UniProtKB-KW
Keywordsi
Enzyme and pathway databases
PathwayCommonsi | Q14160 |
Reactomei | R-HSA-4608870, Asymmetric localization of PCP proteins |
SignaLinki | Q14160 |
Protein family/group databases
MoonDBi | Q14160, Predicted |
Names & Taxonomyi
Protein namesi | Recommended name: Protein scribble homologShort name: Scribble Short name: hScrib Alternative name(s): Protein LAP4 |
Gene namesi | Name:SCRIB Synonyms:CRIB1, KIAA0147, LAP4, SCRB1, VARTUL |
Organismi | Homo sapiens (Human) |
Taxonomic identifieri | 9606 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Proteomesi |
|
Organism-specific databases
HGNCi | HGNC:30377, SCRIB |
MIMi | 607733, gene |
neXtProti | NX_Q14160 |
VEuPathDBi | HostDB:ENSG00000180900.16 |
Subcellular locationi
Cytoplasm and Cytosol
Plasma membrane
- Cell membrane 1 Publication; Peripheral membrane protein
Other locations
- Cell junction 1 Publication
- adherens junction
- lamellipodium
- postsynapse 1 Publication
- presynapse 1 Publication
Note: Targeting to cell-cell junctions which is CDH1-dependent is required for the pro-apoptotic activity. In a subset of CD4+ T-cells, colocalizes with CRTAM at the immunological synapse during the late phase of T-cell activation (By similarity).By similarity
Extracellular region or secreted
- extracellular exosome Source: UniProtKB
Nucleus
- nucleoplasm Source: HPA
Plasma Membrane
- basolateral plasma membrane Source: GO_Central
- immunological synapse Source: UniProtKB
- plasma membrane Source: UniProtKB
Other locations
- adherens junction Source: UniProtKB
- cell junction Source: HPA
- cell-cell junction Source: UniProtKB
- lamellipodium Source: UniProtKB-SubCell
- postsynaptic density Source: GO_Central
- presynapse Source: UniProtKB-SubCell
- Scrib-APC-beta-catenin complex Source: BHF-UCL
Keywords - Cellular componenti
Cell junction, Cell membrane, Cell projection, Cytoplasm, Membrane, SynapsePathology & Biotechi
Involvement in diseasei
Neural tube defects (NTD)1 Publication
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Natural variantiVAR_067219 | 454 | P → S in NTD; protein interactions not affected by the mutation; shows reduced protein localization to the cell membrane. 1 PublicationCorresponds to variant dbSNP:rs1302482009Ensembl. | 1 | |
Natural variantiVAR_067220 | 1535 | R → Q in NTD; protein interactions not affected by the mutation; shows reduced protein localization to the cell membrane. 1 PublicationCorresponds to variant dbSNP:rs782428100Ensembl. | 1 |
Mutagenesis
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Mutagenesisi | 4 | C → S: Loss of palmitoylation. Loss of palmitoylation, localization to cell-cell junctions and function in epithelial cell polarization and signaling pathways regulation; when associated with S-10. 1 Publication | 1 | |
Mutagenesisi | 10 | C → S: Loss of palmitoylation. Loss of palmitoylation, localization to cell-cell junctions and function in epithelial cell polarization and signaling pathways regulation; when associated with S-4. 1 Publication | 1 | |
Mutagenesisi | 22 | C → S: No effect on palmitoylation. 1 Publication | 1 | |
Mutagenesisi | 305 | P → L: Decreased palmitoylation. Loss of targeting to cell-cell junctions. Targeted to the cytoplasm. Alters interaction with TJP2. Loss of pro-apoptotic function. Loss of function in epithelial cell polarization and signaling pathways regulation. 3 Publications | 1 | |
Mutagenesisi | 738 – 739 | LG → AE: Alters interaction with LPP. 1 Publication | 2 | |
Mutagenesisi | 738 | L → R: Loss of anti-proliferative activity. | 1 | |
Mutagenesisi | 872 – 873 | LG → AE: Alters interaction with LPP. 1 Publication | 2 | |
Mutagenesisi | 1014 – 1015 | LG → AE: Loss of interaction with LPP and TRIP6. 1 Publication | 2 | |
Mutagenesisi | 1111 – 1112 | LG → AE: Alters interaction with LPP. 1 Publication | 2 |
Keywords - Diseasei
Disease variantOrganism-specific databases
DisGeNETi | 23513 |
MalaCardsi | SCRIB |
MIMi | 182940, phenotype |
PharmGKBi | PA134936275 |
Miscellaneous databases
Pharosi | Q14160, Tbio |
Genetic variation databases
BioMutai | SCRIB |
DMDMi | 261260101 |
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000188303 | 1 – 1630 | Protein scribble homologAdd BLAST | 1630 |
Amino acid modifications
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Modified residuei | 37 | PhosphoserineCombined sources | 1 | |
Modified residuei | 378 | PhosphothreonineCombined sources | 1 | |
Modified residuei | 475 | PhosphothreonineCombined sources | 1 | |
Modified residuei | 504 | PhosphoserineCombined sources | 1 | |
Modified residuei | 688 | PhosphoserineCombined sources | 1 | |
Modified residuei | 689 | PhosphothreonineCombined sources | 1 | |
Modified residuei | 708 | PhosphoserineCombined sources | 1 | |
Modified residuei | 764 | PhosphoserineCombined sources | 1 | |
Modified residuei | 826 | PhosphothreonineCombined sources | 1 | |
Modified residuei | 835 | PhosphoserineCombined sources | 1 | |
Modified residuei | 853 | PhosphoserineCombined sources | 1 | |
Modified residuei | 875 | PhosphoserineCombined sources | 1 | |
Modified residuei | 939 | PhosphoserineCombined sources | 1 | |
Modified residuei | 1140 | PhosphoserineCombined sources | 1 | |
Modified residuei | 1220 | PhosphoserineCombined sources | 1 | |
Modified residuei | 1223 | PhosphoserineCombined sources | 1 | |
Modified residuei | 1226 | PhosphoserineCombined sources | 1 | |
Modified residuei | 1232 | PhosphoserineCombined sources | 1 | |
Modified residuei | 1276 | PhosphoserineCombined sources | 1 | |
Modified residuei | 1279 | PhosphoserineCombined sources | 1 | |
Modified residuei | 1295 | PhosphoserineCombined sources | 1 | |
Modified residuei | 1298 | PhosphoserineCombined sources | 1 | |
Modified residuei | 1306 | PhosphoserineCombined sources | 1 | |
Modified residuei | 1309 | PhosphoserineCombined sources | 1 | |
Modified residuei | 1342 | PhosphothreonineCombined sources | 1 | |
Modified residuei | 1348 | PhosphoserineCombined sources | 1 | |
Modified residuei | 1378 | PhosphoserineCombined sources | 1 | |
Modified residuei | 1437 | PhosphoserineCombined sources | 1 | |
Modified residuei | 1445 | PhosphoserineCombined sources | 1 | |
Modified residuei | 1448 | PhosphoserineCombined sources | 1 | |
Modified residuei | 1475 | PhosphoserineCombined sources | 1 | |
Modified residuei | 1486 | PhosphoserineCombined sources | 1 | |
Modified residuei | 1508 | PhosphoserineCombined sources | 1 | |
Modified residuei | 1541 | PhosphoserineCombined sources | 1 | |
Modified residuei | 1545 | PhosphothreonineCombined sources | 1 | |
Modified residuei | 1547 | PhosphoserineCombined sources | 1 | |
Modified residuei | 1561 | PhosphoserineCombined sources | 1 | |
Modified residuei | 1566 | PhosphoserineCombined sources | 1 |
Post-translational modificationi
Keywords - PTMi
Lipoprotein, Palmitate, Phosphoprotein, Ubl conjugationProteomic databases
EPDi | Q14160 |
jPOSTi | Q14160 |
MassIVEi | Q14160 |
MaxQBi | Q14160 |
PaxDbi | Q14160 |
PeptideAtlasi | Q14160 |
PRIDEi | Q14160 |
ProteomicsDBi | 59873 [Q14160-1] 59874 [Q14160-2] 59875 [Q14160-3] |
PTM databases
GlyGeni | Q14160, 1 site, 1 O-linked glycan (1 site) |
iPTMneti | Q14160 |
PhosphoSitePlusi | Q14160 |
SwissPalmi | Q14160 |
Expressioni
Tissue specificityi
Gene expression databases
Bgeei | ENSG00000180900, Expressed in lower esophagus mucosa and 211 other tissues |
ExpressionAtlasi | Q14160, baseline and differential |
Genevisiblei | Q14160, HS |
Organism-specific databases
HPAi | ENSG00000180900, Low tissue specificity |
Interactioni
Subunit structurei
Interacts with UBE3A (PubMed:11027293).
Interacts with PAK1 and PAK2 (PubMed:18716323).
Interacts (via PDZ domains) with VANGL2 (By similarity).
Interacts (via PDZ domains) with LPP and TRIP6; the interaction is direct (PubMed:15649318, PubMed:16137684).
Interacts (via PDZ domains) with TJP2 (PubMed:15975580).
Interacts (via PDZ domains) with APC; may mediate APC targeting to adherens junctions of epithelial cells (PubMed:16611247).
Interacts (via PDZ domains) with TSHR; regulates TSHR trafficking and function (PubMed:15775968).
Interacts with ARHGEF7 and GIT1; interacts directly with ARHGEF7 (PubMed:15182672).
Interacts with CTNNB1 (By similarity).
Interacts with MAPK12 (By similarity).
Interacts (via PDZ domains 1 and 3) with MCC (PubMed:19555689, PubMed:22480440).
Interacts with DLG5 (PubMed:28169360).
Interacts with STK4/MST1 and LATS1 in the presence of DLG5 (PubMed:28169360).
Interacts (via PDZ domain 3) with CRTAM (via PDZ-binding motif); the interaction promotes CRTAM and SCRIB polarization in a subset of CD4+ T-cells (By similarity).
By similarity11 Publications(Microbial infection) Interacts (via fourth PDZ domain) with tick-borne encephalitis virus RNA-directed RNA polymerase NS5; this interaction targets viral NS5 to the cell membrane periphery and nucleus and prevents STAT1 phosphorylation, and thus, the activation of the JAK-STAT signaling pathway (PubMed:18042258).
Interacts with HPV E6 (PubMed:11027293).
2 PublicationsBinary interactionsi
Hide detailsQ14160
GO - Molecular functioni
- cadherin binding Source: BHF-UCL
Protein-protein interaction databases
BioGRIDi | 117060, 101 interactors |
ComplexPortali | CPX-6168, Scribble cell polarity complex, DLG1-LLGL2-SCRIB variant CPX-6184, Scribble cell polarity complex, DLG2-LLGL2-SCRIB variant CPX-6185, Scribble cell polarity complex, DLG3-LLGL2-SCRIB variant CPX-6186, Scribble cell polarity complex, DLG4-LLGL2-SCRIB variant CPX-6187, Scribble cell polarity complex, DLG5-LLGL2-SCRIB variant CPX-6188, Scribble cell polarity complex, DLG5-LLGL1-SCRIB variant CPX-6189, Scribble cell polarity complex, DLG4-LLGL1-SCRIB variant CPX-6190, Scribble cell polarity complex, DLG3-LLGL1-SCRIB variant CPX-6191, Scribble cell polarity complex, DLG2-LLGL1-SCRIB variant CPX-6192, Scribble cell polarity complex, DLG1-LLGL1-SCRIB variant |
CORUMi | Q14160 |
DIPi | DIP-31259N |
ELMi | Q14160 |
IntActi | Q14160, 187 interactors |
MINTi | Q14160 |
STRINGi | 9606.ENSP00000349486 |
Miscellaneous databases
RNActi | Q14160, protein |
Structurei
Secondary structure
3D structure databases
SMRi | Q14160 |
ModBasei | Search... |
PDBe-KBi | Search... |
Miscellaneous databases
EvolutionaryTracei | Q14160 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Repeati | 37 – 58 | LRR 1Add BLAST | 22 | |
Repeati | 60 – 81 | LRR 2Add BLAST | 22 | |
Repeati | 83 – 104 | LRR 3Add BLAST | 22 | |
Repeati | 106 – 127 | LRR 4Add BLAST | 22 | |
Repeati | 129 – 150 | LRR 5Add BLAST | 22 | |
Repeati | 152 – 174 | LRR 6Add BLAST | 23 | |
Repeati | 175 – 197 | LRR 7Add BLAST | 23 | |
Repeati | 198 – 219 | LRR 8Add BLAST | 22 | |
Repeati | 221 – 243 | LRR 9Add BLAST | 23 | |
Repeati | 244 – 265 | LRR 10Add BLAST | 22 | |
Repeati | 267 – 288 | LRR 11Add BLAST | 22 | |
Repeati | 290 – 312 | LRR 12Add BLAST | 23 | |
Repeati | 313 – 334 | LRR 13Add BLAST | 22 | |
Repeati | 336 – 357 | LRR 14Add BLAST | 22 | |
Repeati | 359 – 381 | LRR 15Add BLAST | 23 | |
Repeati | 382 – 402 | LRR 16Add BLAST | 21 | |
Domaini | 728 – 815 | PDZ 1PROSITE-ProRule annotationAdd BLAST | 88 | |
Domaini | 862 – 950 | PDZ 2PROSITE-ProRule annotationAdd BLAST | 89 | |
Domaini | 1004 – 1093 | PDZ 3PROSITE-ProRule annotationAdd BLAST | 90 | |
Domaini | 1100 – 1194 | PDZ 4PROSITE-ProRule annotationAdd BLAST | 95 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 818 | Sufficient for targeting to adherens junction and to inhibit cell proliferationAdd BLAST | 818 | |
Regioni | 717 – 1229 | Interaction with ARHGEF71 PublicationAdd BLAST | 513 | |
Regioni | 1105 – 1117 | Interaction with tick-borne encephalitis virus RNA-directed RNA polymerase NS51 PublicationAdd BLAST | 13 |
Coiled coil
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Coiled coili | 458 – 474 | Sequence analysisAdd BLAST | 17 | |
Coiled coili | 656 – 701 | Sequence analysisAdd BLAST | 46 | |
Coiled coili | 1379 – 1419 | Sequence analysisAdd BLAST | 41 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 660 – 695 | Glu-richAdd BLAST | 36 | |
Compositional biasi | 1296 – 1349 | Pro-richAdd BLAST | 54 |
Sequence similaritiesi
Keywords - Domaini
Coiled coil, Leucine-rich repeat, RepeatPhylogenomic databases
eggNOGi | KOG0619, Eukaryota |
HOGENOMi | CLU_000288_18_20_1 |
InParanoidi | Q14160 |
OrthoDBi | 284114at2759 |
PhylomeDBi | Q14160 |
TreeFami | TF351429 |
Family and domain databases
Gene3Di | 2.30.42.10, 4 hits 3.80.10.10, 2 hits |
InterProi | View protein in InterPro IPR001611, Leu-rich_rpt IPR003591, Leu-rich_rpt_typical-subtyp IPR032675, LRR_dom_sf IPR001478, PDZ IPR036034, PDZ_sf |
Pfami | View protein in Pfam PF13855, LRR_8, 2 hits PF00595, PDZ, 4 hits |
SMARTi | View protein in SMART SM00369, LRR_TYP, 11 hits SM00228, PDZ, 4 hits |
SUPFAMi | SSF50156, SSF50156, 4 hits |
PROSITEi | View protein in PROSITE PS51450, LRR, 13 hits PS50106, PDZ, 4 hits |
s (3+)i Sequence
Sequence statusi: Complete.
This entry describes 3 produced by isoformsialternative splicing. AlignAdd to basketThis entry has 3 described isoforms and 7 potential isoforms that are computationally mapped.Show allAlign All
This isoform has been chosen as the sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. canonicali
10 20 30 40 50
MLKCIPLWRC NRHVESVDKR HCSLQAVPEE IYRYSRSLEE LLLDANQLRE
60 70 80 90 100
LPKPFFRLLN LRKLGLSDNE IQRLPPEVAN FMQLVELDVS RNDIPEIPES
110 120 130 140 150
IKFCKALEIA DFSGNPLSRL PDGFTQLRSL AHLALNDVSL QALPGDVGNL
160 170 180 190 200
ANLVTLELRE NLLKSLPASL SFLVKLEQLD LGGNDLEVLP DTLGALPNLR
210 220 230 240 250
ELWLDRNQLS ALPPELGNLR RLVCLDVSEN RLEELPAELG GLVLLTDLLL
260 270 280 290 300
SQNLLRRLPD GIGQLKQLSI LKVDQNRLCE VTEAIGDCEN LSELILTENL
310 320 330 340 350
LMALPRSLGK LTKLTNLNVD RNHLEALPPE IGGCVALSVL SLRDNRLAVL
360 370 380 390 400
PPELAHTTEL HVLDVAGNRL QSLPFALTHL NLKALWLAEN QAQPMLRFQT
410 420 430 440 450
EDDARTGEKV LTCYLLPQQP PPSLEDAGQQ GSLSETWSDA PPSRVSVIQF
460 470 480 490 500
LEAPIGDEDA EEAAAEKRGL QRRATPHPSE LKVMKRSIEG RRSEACPCQP
510 520 530 540 550
DSGSPLPAEE EKRLSAESGL SEDSRPSAST VSEAEPEGPS AEAQGGSQQE
560 570 580 590 600
ATTAGGEEDA EEDYQEPTVH FAEDALLPGD DREIEEGQPE APWTLPGGRQ
610 620 630 640 650
RLIRKDTPHY KKHFKISKLP QPEAVVALLQ GMQPDGEGPV APGGWHNGPH
660 670 680 690 700
APWAPRAQKE EEEEEEGSPQ EEEVEEEEEN RAEEEEASTE EEDKEGAVVS
710 720 730 740 750
APSVKGVSFD QANNLLIEPA RIEEEELTLT ILRQTGGLGI SIAGGKGSTP
760 770 780 790 800
YKGDDEGIFI SRVSEEGPAA RAGVRVGDKL LEVNGVALQG AEHHEAVEAL
810 820 830 840 850
RGAGTAVQMR VWRERMVEPE NAVTITPLRP EDDYSPRERR GGGLRLPLLP
860 870 880 890 900
PESPGPLRQR HVACLARSER GLGFSIAGGK GSTPYRAGDA GIFVSRIAEG
910 920 930 940 950
GAAHRAGTLQ VGDRVLSING VDVTEARHDH AVSLLTAASP TIALLLEREA
960 970 980 990 1000
GGPLPPSPLP HSSPPTAAVA TTSITTATPG VPGLPSLAPS LLAAALEGPY
1010 1020 1030 1040 1050
PVEEIRLPRA GGPLGLSIVG GSDHSSHPFG VQEPGVFISK VLPRGLAARS
1060 1070 1080 1090 1100
GLRVGDRILA VNGQDVRDAT HQEAVSALLR PCLELSLLVR RDPAPPGLRE
1110 1120 1130 1140 1150
LCIQKAPGER LGISIRGGAR GHAGNPRDPT DEGIFISKVS PTGAAGRDGR
1160 1170 1180 1190 1200
LRVGLRLLEV NQQSLLGLTH GEAVQLLRSV GDTLTVLVCD GFEASTDAAL
1210 1220 1230 1240 1250
EVSPGVIANP FAAGIGHRNS LESISSIDRE LSPEGPGKEK ELPGQTLHWG
1260 1270 1280 1290 1300
PEATEAAGRG LQPLKLDYRA LAAVPSAGSV QRVPSGAAGG KMAESPCSPS
1310 1320 1330 1340 1350
GQQPPSPPSP DELPANVKQA YRAFAAVPTS HPPEDAPAQP PTPGPAASPE
1360 1370 1380 1390 1400
QLSFRERQKY FELEVRVPQA EGPPKRVSLV GADDLRKMQE EEARKLQQKR
1410 1420 1430 1440 1450
AQMLREAAEA GAEARLALDG ETLGEEEQED EQPPWASPSP TSRQSPASPP
1460 1470 1480 1490 1500
PLGGGAPVRT AKAERRHQER LRVQSPEPPA PERALSPAEL RALEAEKRAL
1510 1520 1530 1540 1550
WRAARMKSLE QDALRAQMVL SRSQEGRGTR GPLERLAEAP SPAPTPSPTP
1560 1570 1580 1590 1600
VEDLGPQTST SPGRLSPDFA EELRSLEPSP SPGPQEEDGE VALVLLGRPS
1610 1620 1630
PGAVGPEDVA LCSSRRPVRP GRRGLGPVPS
Computationally mapped potential isoform sequencesi
There are 7 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketA0A669KB89 | A0A669KB89_HUMAN | Protein scribble homolog | SCRIB | 1,658 | Annotation score: | ||
H0YCG0 | H0YCG0_HUMAN | Protein scribble homolog | SCRIB | 650 | Annotation score: | ||
A0A0G2JPP5 | A0A0G2JPP5_HUMAN | Protein scribble homolog | SCRIB | 1,655 | Annotation score: | ||
A0A0G2JNZ2 | A0A0G2JNZ2_HUMAN | Protein scribble homolog | SCRIB | 1,630 | Annotation score: | ||
A0A0G2JMS7 | A0A0G2JMS7_HUMAN | Protein scribble homolog | SCRIB | 1,549 | Annotation score: | ||
A0A669KAX5 | A0A669KAX5_HUMAN | Protein scribble homolog | SCRIB | 214 | Annotation score: | ||
H0YDF9 | H0YDF9_HUMAN | Protein scribble homolog | SCRIB | 140 | Annotation score: |
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Sequence conflicti | 674 | V → E in AAP88017 (PubMed:15649318).Curated | 1 | |
Sequence conflicti | 674 | V → E in AAL38976 (PubMed:15806148).Curated | 1 | |
Sequence conflicti | 674 | V → E in AAP88018 (Ref. 3) Curated | 1 | |
Sequence conflicti | 674 | V → E in BAA09768 (PubMed:8590280).Curated | 1 | |
Sequence conflicti | 1489 | E → K in AAL38976 (PubMed:15806148).Curated | 1 |
Natural variant
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Natural variantiVAR_019429 | 422 | P → L4 PublicationsCorresponds to variant dbSNP:rs6558394Ensembl. | 1 | |
Natural variantiVAR_067219 | 454 | P → S in NTD; protein interactions not affected by the mutation; shows reduced protein localization to the cell membrane. 1 PublicationCorresponds to variant dbSNP:rs1302482009Ensembl. | 1 | |
Natural variantiVAR_067220 | 1535 | R → Q in NTD; protein interactions not affected by the mutation; shows reduced protein localization to the cell membrane. 1 PublicationCorresponds to variant dbSNP:rs782428100Ensembl. | 1 |
Alternative sequence
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Alternative sequenceiVSP_010906 | 1 – 81 | Missing in isoform 2. 1 PublicationAdd BLAST | 81 | |
Alternative sequenceiVSP_010908 | 1565 | L → LPLSGKKFDYRAFAALPSSR PVYDIQ in isoform 3. 1 Publication | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AF240677 mRNA Translation: AAP88017.1 AY062238 mRNA Translation: AAL38976.1 AF271734 mRNA Translation: AAP88018.2 D63481 mRNA Translation: BAA09768.3 AC105219 Genomic DNA No translation available. BC009490 mRNA Translation: AAH09490.2 BC014632 mRNA Translation: AAH14632.2 |
CCDSi | CCDS6411.1 [Q14160-1] CCDS6412.1 [Q14160-3] |
RefSeqi | NP_056171.3, NM_015356.4 NP_874365.3, NM_182706.4 |
Genome annotation databases
Ensembli | ENST00000320476; ENSP00000322938; ENSG00000180900 ENST00000356994; ENSP00000349486; ENSG00000180900 ENST00000377533; ENSP00000366756; ENSG00000180900 |
GeneIDi | 23513 |
KEGGi | hsa:23513 |
UCSCi | uc003yzo.1, human [Q14160-1] |
Keywords - Coding sequence diversityi
Alternative splicingSimilar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AF240677 mRNA Translation: AAP88017.1 AY062238 mRNA Translation: AAL38976.1 AF271734 mRNA Translation: AAP88018.2 D63481 mRNA Translation: BAA09768.3 AC105219 Genomic DNA No translation available. BC009490 mRNA Translation: AAH09490.2 BC014632 mRNA Translation: AAH14632.2 |
CCDSi | CCDS6411.1 [Q14160-1] CCDS6412.1 [Q14160-3] |
RefSeqi | NP_056171.3, NM_015356.4 NP_874365.3, NM_182706.4 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
1UJU | NMR | - | A | 1096-1193 | [»] | |
1WHA | NMR | - | A | 860-951 | [»] | |
1X5Q | NMR | - | A | 718-814 | [»] | |
2W4F | X-ray | 1.30 | A | 725-815 | [»] | |
4WYT | X-ray | 2.60 | A | 992-1203 | [»] | |
4WYU | X-ray | 2.50 | A/B | 992-1203 | [»] | |
5VWC | X-ray | 1.91 | A | 725-815 | [»] | |
5VWI | X-ray | 1.75 | A/B | 1002-1092 | [»] | |
5VWK | X-ray | 2.35 | A/B/C/D | 700-816 | [»] | |
6EEY | X-ray | 1.15 | A | 1098-1189 | [»] | |
6ESP | NMR | - | A | 719-829 | [»] | |
6MS1 | X-ray | 1.35 | A/B | 722-815 | [»] | |
6MTU | X-ray | 2.14 | A/B | 700-816 | [»] | |
6MTV | X-ray | 2.60 | A/B | 700-816 | [»] | |
6MYE | X-ray | 1.10 | A | 725-815 | [»] | |
6MYF | X-ray | 1.60 | A | 725-815 | [»] | |
SMRi | Q14160 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
BioGRIDi | 117060, 101 interactors |
ComplexPortali | CPX-6168, Scribble cell polarity complex, DLG1-LLGL2-SCRIB variant CPX-6184, Scribble cell polarity complex, DLG2-LLGL2-SCRIB variant CPX-6185, Scribble cell polarity complex, DLG3-LLGL2-SCRIB variant CPX-6186, Scribble cell polarity complex, DLG4-LLGL2-SCRIB variant CPX-6187, Scribble cell polarity complex, DLG5-LLGL2-SCRIB variant CPX-6188, Scribble cell polarity complex, DLG5-LLGL1-SCRIB variant CPX-6189, Scribble cell polarity complex, DLG4-LLGL1-SCRIB variant CPX-6190, Scribble cell polarity complex, DLG3-LLGL1-SCRIB variant CPX-6191, Scribble cell polarity complex, DLG2-LLGL1-SCRIB variant CPX-6192, Scribble cell polarity complex, DLG1-LLGL1-SCRIB variant |
CORUMi | Q14160 |
DIPi | DIP-31259N |
ELMi | Q14160 |
IntActi | Q14160, 187 interactors |
MINTi | Q14160 |
STRINGi | 9606.ENSP00000349486 |
Protein family/group databases
MoonDBi | Q14160, Predicted |
PTM databases
GlyGeni | Q14160, 1 site, 1 O-linked glycan (1 site) |
iPTMneti | Q14160 |
PhosphoSitePlusi | Q14160 |
SwissPalmi | Q14160 |
Genetic variation databases
BioMutai | SCRIB |
DMDMi | 261260101 |
Proteomic databases
EPDi | Q14160 |
jPOSTi | Q14160 |
MassIVEi | Q14160 |
MaxQBi | Q14160 |
PaxDbi | Q14160 |
PeptideAtlasi | Q14160 |
PRIDEi | Q14160 |
ProteomicsDBi | 59873 [Q14160-1] 59874 [Q14160-2] 59875 [Q14160-3] |
Protocols and materials databases
Antibodypediai | 43533, 133 antibodies |
DNASUi | 23513 |
Genome annotation databases
Ensembli | ENST00000320476; ENSP00000322938; ENSG00000180900 ENST00000356994; ENSP00000349486; ENSG00000180900 ENST00000377533; ENSP00000366756; ENSG00000180900 |
GeneIDi | 23513 |
KEGGi | hsa:23513 |
UCSCi | uc003yzo.1, human [Q14160-1] |
Organism-specific databases
CTDi | 23513 |
DisGeNETi | 23513 |
GeneCardsi | SCRIB |
HGNCi | HGNC:30377, SCRIB |
HPAi | ENSG00000180900, Low tissue specificity |
MalaCardsi | SCRIB |
MIMi | 182940, phenotype 607733, gene |
neXtProti | NX_Q14160 |
PharmGKBi | PA134936275 |
VEuPathDBi | HostDB:ENSG00000180900.16 |
HUGEi | Search... |
GenAtlasi | Search... |
Phylogenomic databases
eggNOGi | KOG0619, Eukaryota |
HOGENOMi | CLU_000288_18_20_1 |
InParanoidi | Q14160 |
OrthoDBi | 284114at2759 |
PhylomeDBi | Q14160 |
TreeFami | TF351429 |
Enzyme and pathway databases
PathwayCommonsi | Q14160 |
Reactomei | R-HSA-4608870, Asymmetric localization of PCP proteins |
SignaLinki | Q14160 |
Miscellaneous databases
BioGRID-ORCSi | 23513, 24 hits in 992 CRISPR screens |
ChiTaRSi | SCRIB, human |
EvolutionaryTracei | Q14160 |
GeneWikii | SCRIB |
GenomeRNAii | 23513 |
Pharosi | Q14160, Tbio |
PROi | PR:Q14160 |
RNActi | Q14160, protein |
SOURCEi | Search... |
Gene expression databases
Bgeei | ENSG00000180900, Expressed in lower esophagus mucosa and 211 other tissues |
ExpressionAtlasi | Q14160, baseline and differential |
Genevisiblei | Q14160, HS |
Family and domain databases
Gene3Di | 2.30.42.10, 4 hits 3.80.10.10, 2 hits |
InterProi | View protein in InterPro IPR001611, Leu-rich_rpt IPR003591, Leu-rich_rpt_typical-subtyp IPR032675, LRR_dom_sf IPR001478, PDZ IPR036034, PDZ_sf |
Pfami | View protein in Pfam PF13855, LRR_8, 2 hits PF00595, PDZ, 4 hits |
SMARTi | View protein in SMART SM00369, LRR_TYP, 11 hits SM00228, PDZ, 4 hits |
SUPFAMi | SSF50156, SSF50156, 4 hits |
PROSITEi | View protein in PROSITE PS51450, LRR, 13 hits PS50106, PDZ, 4 hits |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | SCRIB_HUMAN | |
Accessioni | Q14160Primary (citable) accession number: Q14160 Secondary accession number(s): Q6P496 Q96GG1 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | July 19, 2004 |
Last sequence update: | October 13, 2009 | |
Last modified: | April 7, 2021 | |
This is version 212 of the entry and version 4 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Chordata Protein Annotation Program | |
Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. |
Miscellaneousi
Keywords - Technical termi
3D-structure, Reference proteomeDocuments
- Human chromosome 8
Human chromosome 8: entries, gene names and cross-references to MIM - Human entries with genetic variants
List of human entries with genetic variants - Human variants curated from literature reports
Index of human variants curated from literature reports - MIM cross-references
Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot - PDB cross-references
Index of Protein Data Bank (PDB) cross-references - SIMILARITY comments
Index of protein domains and families