P62277 · RS13_HUMAN
- ProteinSmall ribosomal subunit protein uS15
- GeneRPS13
- StatusUniProtKB reviewed (Swiss-Prot)
- Organism
- Amino acids151 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score5/5
Function
function
Component of the small ribosomal subunit. The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. Part of the small subunit (SSU) processome, first precursor of the small eukaryotic ribosomal subunit. During the assembly of the SSU processome in the nucleolus, many ribosome biogenesis factors, an RNA chaperone and ribosomal proteins associate with the nascent pre-rRNA and work in concert to generate RNA folding, modifications, rearrangements and cleavage as well as targeted degradation of pre-ribosomal RNA by the RNA exosome (PubMed:34516797).
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | cytoplasm | |
Cellular Component | cytosol | |
Cellular Component | cytosolic ribosome | |
Cellular Component | cytosolic small ribosomal subunit | |
Cellular Component | extracellular exosome | |
Cellular Component | focal adhesion | |
Cellular Component | membrane | |
Cellular Component | nucleolus | |
Cellular Component | nucleoplasm | |
Cellular Component | nucleus | |
Cellular Component | postsynaptic density | |
Cellular Component | ribosome | |
Cellular Component | small-subunit processome | |
Molecular Function | mRNA 5'-UTR binding | |
Molecular Function | mRNA binding | |
Molecular Function | RNA binding | |
Molecular Function | small ribosomal subunit rRNA binding | |
Molecular Function | structural constituent of ribosome | |
Biological Process | cytoplasmic translation | |
Biological Process | negative regulation of RNA splicing | |
Biological Process | ribosomal small subunit biogenesis | |
Biological Process | translation |
Keywords
- Molecular function
Enzyme and pathway databases
Protein family/group databases
Names & Taxonomy
Protein names
- Recommended nameSmall ribosomal subunit protein uS15
- Alternative names
Gene names
Organism names
- Organism
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Primates > Haplorrhini > Catarrhini > Hominidae > Homo
Accessions
- Primary accessionP62277
- Secondary accessions
Proteomes
Organism-specific databases
Subcellular Location
Disease & Variants
Variants
We now provide the "Disease & Variants" viewer in its own tab.
The viewer provides 94 variants from UniProt as well as other sources including ClinVar and dbSNP.
Organism-specific databases
Miscellaneous
Chemistry
Genetic variation databases
PTM/Processing
Features
Showing features for initiator methionine, chain, modified residue (large scale data), modified residue, cross-link.
Type | ID | Position(s) | Source | Description | ||
---|---|---|---|---|---|---|
Initiator methionine | 1 | UniProt | Removed | |||
Chain | PRO_0000115661 | 2-151 | UniProt | Small ribosomal subunit protein uS15 | ||
Modified residue (large scale data) | 12 | PRIDE | Phosphoserine | |||
Modified residue (large scale data) | 14 | PRIDE | Phosphoserine | |||
Modified residue | 27 | UniProt | N6-acetyllysine; alternate | |||
Modified residue | 27 | UniProt | N6-succinyllysine; alternate | |||
Cross-link | 27 | UniProt | Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) | |||
Modified residue | 30 | UniProt | Phosphoserine | |||
Modified residue (large scale data) | 30 | PRIDE | Phosphoserine | |||
Modified residue | 34 | UniProt | N6-succinyllysine | |||
Modified residue | 38 | UniProt | Phosphotyrosine | |||
Modified residue (large scale data) | 38 | PRIDE | Phosphotyrosine | |||
Cross-link | 43 | UniProt | Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) | |||
Post-translational modification
Ubiquitinated at Lys-27 by RNF14 and RNF25 in response to ribosome collisions (ribosome stalling).
Keywords
- PTM
Proteomic databases
PTM databases
Expression
Interaction
Subunit
Component of the small ribosomal subunit. Part of the small subunit (SSU) processome, composed of more than 70 proteins and the RNA chaperone small nucleolar RNA (snoRNA) U3 (PubMed:34516797).
Binary interactions
Type | Entry 1 | Entry 2 | Number of experiments | IntAct | |
---|---|---|---|---|---|
BINARY | P62277 | LRRK2 Q5S007 | 3 | EBI-351850, EBI-5323863 | |
BINARY | P62277 | MAP3K14 Q99558 | 3 | EBI-351850, EBI-358011 | |
BINARY | P62277 | PDCD4 Q53EL6 | 2 | EBI-351850, EBI-935824 |
Complex viewer
Protein-protein interaction databases
Miscellaneous
Structure
Sequence
- Sequence statusComplete
- Length151
- Mass (Da)17,222
- Last updated2007-01-23 v2
- MD5 ChecksumD86AC6C70EF9F6971BD3A95D11CA065B
Computationally mapped potential isoform sequences
There are 2 potential isoforms mapped to this entry
Features
Showing features for sequence conflict.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Sequence conflict | 82 | in Ref. 8; AAC15854 | |||
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
L01124 EMBL· GenBank· DDBJ | AAA60283.1 EMBL· GenBank· DDBJ | mRNA | ||
X79239 EMBL· GenBank· DDBJ | CAA55821.1 EMBL· GenBank· DDBJ | mRNA | ||
D88010 EMBL· GenBank· DDBJ | BAA13528.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AK312060 EMBL· GenBank· DDBJ | BAG34996.1 EMBL· GenBank· DDBJ | mRNA | ||
CH471064 EMBL· GenBank· DDBJ | EAW68448.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
BC000475 EMBL· GenBank· DDBJ | AAH00475.1 EMBL· GenBank· DDBJ | mRNA | ||
BC006772 EMBL· GenBank· DDBJ | AAH06772.1 EMBL· GenBank· DDBJ | mRNA | ||
BC029732 EMBL· GenBank· DDBJ | AAH29732.1 EMBL· GenBank· DDBJ | mRNA | ||
BC066322 EMBL· GenBank· DDBJ | AAH66322.1 EMBL· GenBank· DDBJ | mRNA | ||
BC100032 EMBL· GenBank· DDBJ | AAI00033.1 EMBL· GenBank· DDBJ | mRNA | ||
L05090 EMBL· GenBank· DDBJ | AAC15854.1 EMBL· GenBank· DDBJ | mRNA |