J9WN85 · J9WN85_9AVES

  • Protein
    V(D)J recombination-activating protein 2
  • Gene
    RAG2
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    2/5

Function

Features

Showing features for binding site.

148250100150200250300350400450
TypeIDPosition(s)Description
Binding site412Zn2+ 1 (UniProtKB | ChEBI)
Binding site416Zn2+ 1 (UniProtKB | ChEBI)
Binding site439Zn2+ 1 (UniProtKB | ChEBI)
Binding site445Zn2+ 1 (UniProtKB | ChEBI)
Binding site448Zn2+ 1 (UniProtKB | ChEBI)
Binding site451Zn2+ 1 (UniProtKB | ChEBI)
Binding site471Zn2+ 1 (UniProtKB | ChEBI)
Binding site474Zn2+ 1 (UniProtKB | ChEBI)

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular ComponentDNA recombinase complex
Cellular Componentnucleus
Molecular Functionmetal ion binding
Molecular Functionsequence-specific DNA binding
Biological Processchromatin organization
Biological ProcessV(D)J recombination

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    V(D)J recombination-activating protein 2

Gene names

    • Name
      RAG2

Organism names

  • Taxonomic identifier
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Archelosauria > Archosauria > Dinosauria > Saurischia > Theropoda > Coelurosauria > Aves > Palaeognathae > Apterygiformes > Apterygidae > Apteryx > Apteryx mantelli

Accessions

  • Primary accession
    J9WN85

Subcellular Location

Family & Domains

Features

Showing features for region, domain.

TypeIDPosition(s)Description
Region354-374Disordered
Domain407-482Recombination activating protein 2 PHD

Sequence similarities

Belongs to the RAG2 family.

Keywords

Family and domain databases

Sequence

  • Sequence status
    Fragment
  • Length
    482
  • Mass (Da)
    53,800
  • Last updated
    2012-11-28 v1
  • Checksum
    0831DE47F01BB4E1
ISNSSLIQPGFSLLNFDGHVFFFGQKGWPKRSCPTGVFLLDIKQNELKMKPAIFSKDSCYLPPLRYPAICTLRGNAESDKYQYIIHGGKTPNNDLSDKIYIMSLVSKNSKRTTFQCIEKDLAGDVPEARYGHTINVVHSRGKSMSVIFGGRSYVPLGQRTTEKWNSVVDCLPSVFLVDFEFGCCTSYILPELQDGLSFHVSVAKNDTIYILGGHSLQNNIRAPSLYKLKVDLPLGSPAVTCTILPGGISVSSAVVTQIGDTEFVLVGGYQSDNQKRLVCNTIVLEDNKIEIVERETPRWTPDIKHCRIWFGCDMGKGSVLLGIPGDNKQMISDANYFYILRCRGAEEDEEEELTAQTCSQTSTEDPGDSTPFEDSEEFCFSAEASSFDVDDTDTYNEDDEEDESETGYWITCSASCNVNINTWVPFYSTELNKPAMILCSSRDGHWVHAQCMDLSETMLLHLSEANVKYFCNEHVDLNKGLQ

Features

Showing features for non-terminal residue.

TypeIDPosition(s)Description
Non-terminal residue1
Non-terminal residue482

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
JX533401
EMBL· GenBank· DDBJ
AFS17659.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.
FeedbackHelp