D4ABD7 · D4ABD7_RAT
- ProteinThyroid hormone receptor interactor 11
- GeneTrip11
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids1973 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score3/5
Function
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | acrosomal membrane | |
Cellular Component | cis-Golgi network | |
Cellular Component | endoplasmic reticulum-Golgi intermediate compartment | |
Cellular Component | Golgi apparatus | |
Cellular Component | inner acrosomal membrane | |
Cellular Component | outer acrosomal membrane | |
Molecular Function | small GTPase binding | |
Biological Process | bone development | |
Biological Process | cartilage development | |
Biological Process | chondrocyte differentiation involved in endochondral bone morphogenesis | |
Biological Process | endoplasmic reticulum to Golgi vesicle-mediated transport | |
Biological Process | Golgi organization | |
Biological Process | Golgi ribbon formation | |
Biological Process | inner ear receptor cell stereocilium organization | |
Biological Process | protein glycosylation | |
Biological Process | protein transmembrane transport | |
Biological Process | ventricular septum development | |
Biological Process | vesicle tethering to Golgi |
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Organism
- Strain
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Glires > Rodentia > Myomorpha > Muroidea > Muridae > Murinae > Rattus
Accessions
- Primary accessionD4ABD7
Proteomes
Organism-specific databases
Subcellular Location
PTM/Processing
Proteomic databases
Expression
Gene expression databases
Structure
Family & Domains
Features
Showing features for region, coiled coil, compositional bias, domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 41-65 | Disordered | ||||
Sequence: GTEDVPDLPNSGREENGATHSVLRS | ||||||
Coiled coil | 241-360 | |||||
Sequence: QQKLTEISRRHREELRDYEERIEELENLLQQGGSGVTVTDHSKVYEMQNTIQSLQMERVESSRKIEDLENKIKEIHKRLSSAEHDREVCKKEQERLEMEKRQMAEQCERLKLDCREAQQS | ||||||
Compositional bias | 620-636 | Polar residues | ||||
Sequence: VRSELTQSQTQGSNSNL | ||||||
Region | 620-639 | Disordered | ||||
Sequence: VRSELTQSQTQGSNSNLKDD | ||||||
Compositional bias | 842-871 | Basic and acidic residues | ||||
Sequence: IEEKDRSLGSMKEENNHLQEELERLREQQS | ||||||
Region | 842-888 | Disordered | ||||
Sequence: IEEKDRSLGSMKEENNHLQEELERLREQQSRAVPVPEPRTLDSTTEL | ||||||
Coiled coil | 1019-1046 | |||||
Sequence: IKERELEIKLLNEKNISLTKQIDQLSKD | ||||||
Coiled coil | 1120-1173 | |||||
Sequence: LSAKEAALIKLQDENKKMSTRFESSGQDMFKETIQNLSRIIREKDIEIDALSQK | ||||||
Coiled coil | 1198-1253 | |||||
Sequence: FEELLQERDKLKQQVKKMEEWKQQVMTTVQNMQHESAQLQEELHQLQAQVSVDSDN | ||||||
Region | 1308-1336 | Disordered | ||||
Sequence: PQLSPGSSLTTQAAEPLKASQCSGPHESS | ||||||
Region | 1358-1390 | Disordered | ||||
Sequence: RTLQENNHRLSDSMAASSEGERKEHEQTDSEVK | ||||||
Compositional bias | 1372-1390 | Basic and acidic residues | ||||
Sequence: AASSEGERKEHEQTDSEVK | ||||||
Coiled coil | 1547-1652 | |||||
Sequence: LKQKQMETSTLQNEVQRLRDKEARLNQELQRLRDHLLESEDSHTREALAAEDREAKLRKKVSVLEEKLVSSSNAMENASHQASVQVESLQEQLNMVSKQRDETALQ | ||||||
Coiled coil | 1682-1761 | |||||
Sequence: KAMYSAELEKQNQLLTEWKKKAESLEGKVLSLQERLDEANAALDSASRLTEQLDLKEEQIEELKKQNELHQEMLDDAQKK | ||||||
Domain | 1768-1817 | GRIP | ||||
Sequence: STEGKVDKVLMRNLFIGHFHTPKNQRHEVLRLMGSILGVKREEMEQLFAE | ||||||
Region | 1866-1900 | Disordered | ||||
Sequence: SHPSVPPPKLSVHDLKPLDSPGRRKVDTGTAEGFR | ||||||
Compositional bias | 1881-1900 | Basic and acidic residues | ||||
Sequence: KPLDSPGRRKVDTGTAEGFR |
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length1,973
- Mass (Da)225,902
- Last updated2022-05-25 v4
- ChecksumA7390503589ABA32
Computationally mapped potential isoform sequences
There is 1 potential isoform mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
A0A8I5ZKA2 | A0A8I5ZKA2_RAT | Trip11 | 1914 |
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 620-636 | Polar residues | ||||
Sequence: VRSELTQSQTQGSNSNL | ||||||
Compositional bias | 842-871 | Basic and acidic residues | ||||
Sequence: IEEKDRSLGSMKEENNHLQEELERLREQQS | ||||||
Compositional bias | 1372-1390 | Basic and acidic residues | ||||
Sequence: AASSEGERKEHEQTDSEVK | ||||||
Compositional bias | 1881-1900 | Basic and acidic residues | ||||
Sequence: KPLDSPGRRKVDTGTAEGFR |
Keywords
- Technical term