A8XVQ7 · A8XVQ7_CAEBR

Function

Features

Showing features for dna binding.

1735100200300400500600700
TypeIDPosition(s)Description
DNA binding654-713Homeobox

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specific
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA binding
Biological Processregulation of transcription by RNA polymerase II

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    DNA-binding protein SATB
  • Alternative names
    • Special AT-rich sequence-binding protein

Gene names

    • ORF names
      CBG19489
      , CBG_19489

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • AF16
  • Taxonomic lineage
    Eukaryota > Metazoa > Ecdysozoa > Nematoda > Chromadorea > Rhabditida > Rhabditina > Rhabditomorpha > Rhabditoidea > Rhabditidae > Peloderinae > Caenorhabditis

Accessions

  • Primary accession
    A8XVQ7

Proteomes

Organism-specific databases

Subcellular Location

Keywords

  • Cellular component

Family & Domains

Features

Showing features for domain, compositional bias, region.

TypeIDPosition(s)Description
Domain168-254CUT
Compositional bias416-442Polar residues
Region416-446Disordered
Domain545-631CUT
Domain652-712Homeobox
Region706-735Disordered
Compositional bias716-735Polar residues

Sequence similarities

Belongs to the CUT homeobox family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    735
  • Mass (Da)
    84,704
  • Last updated
    2008-12-16 v2
  • Checksum
    D0A5EBD88AF72D3C
MYQNWREEDSKAAMTSSGGYPRDFFGTDALWDTESFGMTPTSSFGAPNVSIPVQSPDKKNGLLYQRQHGPWSAQTNDGVMDKETYFNENLENTVEKERCNEMENANPVVYADDENTKILEEKSSVPATTLFQSTSGPDNFWNSNPYKAWNDSPITLKPTELMDNSMHQLDAPIPGNIDTEELCEKLTQEIHKYYISRQYFAKKVLNKGPKVLRKMLKDPKPWNKLQSARVNYIRIYNWLNLPLEKRLGILDMELPEKKCETTEAVKADLLNAPLPGKPDLDTEQLTEQLVQEIKTHEIPQAKFAKNDVRIYDRFNLPAEERMEYFKEDNKNCSKKRKSFEYNVIDHHDNYQPIQNNLDVDDSNNQYNQQALQTSTDMGSNDALCIPESQIQTYLHRDDINDQYNHELLQNSNVRMHNHDPLLSNSDTDDSNNQYSHQPNNPYKRQPFPADINCAREVFKKEPFHSVDSVFNKMARRTQTPSEMRSPSLNDVARLDDSYRGGSDNNSEWFSSSTIRDPNFFNFLGTKPTSSSSSDSAFEYYEGLLAAPLADGAVLDTKILSDSILQELAIKKIPQTIFAKRVANRCQGTLSVLLRKPKPWDCVKTGRGIYVRLYNWYQLPENQRMEIVDKKINCAVPEKKPVDGKGIRTTEAPAQKKPRTVFFPVQKSALQSIFEENPKPSADVMAHIAQTLELDNDSVVNFFQNTRKRTNDQMKRNRHPQNNFQDYQENQKTDYY

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias416-442Polar residues
Compositional bias716-735Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
HE601321
EMBL· GenBank· DDBJ
CAP36726.2
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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