A0A7K6SUE0 · A0A7K6SUE0_CALNI

Function

function

May regulate AMPA receptor content at nascent synapses, and have a role in postsynaptic development and maturation.

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentdendritic spine
Cellular Componentexcitatory synapse
Cellular Componentpostsynaptic density membrane
Cellular Componentsynaptic vesicle membrane
Biological Processpositive regulation of synapse assembly
Biological Processsynaptic vesicle clustering

Names & Taxonomy

Protein names

  • Recommended name
    Synapse differentiation-inducing gene protein 1
  • Alternative names
    • Dispanin subfamily C member 2
    • Transmembrane protein 90B

Gene names

    • Name
      Syndig1
    • ORF names
      CALNIC_R02593

Organism names

  • Taxonomic identifier
  • Strain
    • OUT-0007
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Archelosauria > Archosauria > Dinosauria > Saurischia > Theropoda > Coelurosauria > Aves > Neognathae > Neoaves > Columbimorphae > Columbiformes > Columbidae > Caloenas

Accessions

  • Primary accession
    A0A7K6SUE0

Proteomes

Subcellular Location

Cell membrane
; Single-pass type II membrane protein
Cell projection, dendrite
Early endosome membrane
; Single-pass type II membrane protein
Postsynaptic density membrane

Features

Showing features for transmembrane.

TypeIDPosition(s)Description
Transmembrane182-205Helical
Transmembrane226-252Helical

Keywords

PTM/Processing

Keywords

Interaction

Subunit

Homodimer. Interacts with GRIA1 and GRIA2.

Family & Domains

Sequence similarities

Belongs to the CD225/Dispanin family.

Keywords

Family and domain databases

Sequence

  • Sequence status
    Fragment
  • Length
    258
  • Mass (Da)
    28,883
  • Last updated
    2021-04-07 v1
  • Checksum
    698A76C0E93BF9A8
MDGLVEKNSVLMHNKITEAGKRNGLINTRNLVAESRDGLVSVYPTPHYQSHRASSLSSPNCLENGRNDPVQQLLDPNMLQQTVESHYRPNIILYSENVLHSWGDSIGPECCETTFIEDHSPTKDSLEYPDSKFIDLTVDDIKIHTLSYDVEEEDDFQELESDYSSDTESEDNFLMMPPRDHLGLTVFSMLCCFWPLGIAAFYLSHETNKAIAKGDFHHASSSSRRALFLAVLSITIGTGIYVGVAVALIAYLSKNNHL

Features

Showing features for non-terminal residue.

TypeIDPosition(s)Description
Non-terminal residue1
Non-terminal residue258

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
VZSB01001215
EMBL· GenBank· DDBJ
NWX01505.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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