A0A7I8KLV8 · A0A7I8KLV8_SPIIN
- ProteinDNA ligase
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids1047 (go to sequence)
- Protein existenceInferred from homology
- Annotation score3/5
Function
Catalytic activity
Cofactor
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Aspect | Term | |
---|---|---|
Cellular Component | DNA ligase IV complex | |
Molecular Function | ATP binding | |
Molecular Function | DNA binding | |
Molecular Function | DNA ligase (ATP) activity | |
Biological Process | DNA biosynthetic process | |
Biological Process | DNA ligation involved in DNA repair | |
Biological Process | DNA recombination | |
Biological Process | double-strand break repair via nonhomologous end joining | |
Biological Process | nucleotide-excision repair, DNA gap filling |
Keywords
- Molecular function
- Biological process
- Ligand
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameDNA ligase
- EC number
Gene names
Organism names
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Araceae > Lemnoideae > Spirodela
Accessions
- Primary accessionA0A7I8KLV8
Proteomes
Subcellular Location
Structure
Family & Domains
Features
Showing features for domain, region, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 331-480 | ATP-dependent DNA ligase family profile | ||||
Sequence: GLETDRQLCYVAFDVLYAGDTSVIHQSLAERHALLQKVLRPVRGRLEILVPDGGLNNSRPLGEPCWSVVANTLDDVERFYKETIENRDEGIILKDLGSKWEPSDRSGKWLKLKPDYIHAGADLDVLIIGGYFGSGRRGGQVAQFLMGLSD | ||||||
Region | 604-630 | Disordered | ||||
Sequence: HGTTQSAQDRGTLQEHSKHEKVSKKGK | ||||||
Domain | 650-738 | BRCT | ||||
Sequence: EETLIFTDMMLYFVNIPSSSSIDYFHKLVAENGGTFSMNLNDSVTHCIAADKKGIKYRAAMRHGDIFHYSWVLDCCAQKRLLHLQPKYF | ||||||
Domain | 837-909 | BRCT | ||||
Sequence: HGGQVSGDLSGATHLVAYSAPPSSERLFGTIYDSCSPGERRLLHSRRLHVVDHSWLEESLVNEERLPEDHFSL | ||||||
Region | 953-977 | Disordered | ||||
Sequence: EGAEEPRKRGGGDARPAARRTRRRM | ||||||
Compositional bias | 954-972 | Basic and acidic residues | ||||
Sequence: GAEEPRKRGGGDARPAARR | ||||||
Region | 1000-1047 | Disordered | ||||
Sequence: EKRDSVDDPLPAMLQLPSLQGNRSPSPAGGAKRKVSYKEAAAQLLGDP |
Sequence similarities
Belongs to the ATP-dependent DNA ligase family.
Keywords
- Domain
Family and domain databases
Sequence
- Sequence statusComplete
- Length1,047
- Mass (Da)118,344
- Last updated2021-04-07 v1
- Checksum53E1B41A89B9E5AD
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 954-972 | Basic and acidic residues | ||||
Sequence: GAEEPRKRGGGDARPAARR |
Keywords
- Technical term