A0A6J1IRH7 · A0A6J1IRH7_CUCMA
- ProteinGermin-like protein
- GeneLOC111477813
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids178 (go to sequence)
- Protein existenceInferred from homology
- Annotation score2/5
Function
Features
Showing features for binding site.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Binding site | 67 | oxalate (UniProtKB | ChEBI) | ||||
Sequence: N | ||||||
Binding site | 70 | Mn2+ (UniProtKB | ChEBI) | ||||
Sequence: H | ||||||
Binding site | 72 | Mn2+ (UniProtKB | ChEBI) | ||||
Sequence: H | ||||||
Binding site | 72 | oxalate (UniProtKB | ChEBI) | ||||
Sequence: H | ||||||
Binding site | 77 | Mn2+ (UniProtKB | ChEBI) | ||||
Sequence: E | ||||||
Binding site | 77 | oxalate (UniProtKB | ChEBI) | ||||
Sequence: E | ||||||
Binding site | 118 | Mn2+ (UniProtKB | ChEBI) | ||||
Sequence: H |
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | apoplast | |
Molecular Function | manganese ion binding |
Keywords
- Ligand
Names & Taxonomy
Protein names
- Recommended nameGermin-like protein
Gene names
Organism names
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > fabids > Cucurbitales > Cucurbitaceae > Cucurbiteae > Cucurbita
Accessions
- Primary accessionA0A6J1IRH7
Proteomes
Subcellular Location
PTM/Processing
Keywords
- PTM
Interaction
Subunit
Oligomer (believed to be a pentamer but probably hexamer).
Structure
Family & Domains
Features
Showing features for domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 22-172 | Cupin type-1 | ||||
Sequence: NGLNKVGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYAPRGINPPHTHPRATEILTVLEGTLLVGFVTSNTENRLFTKVLQKGDVFVFPIGLIHFQQNIGHGHAVAIAALSSQNPGVITIANAVFGSNPDIPTDVLAKAFQTHKPIIA |
Sequence similarities
Belongs to the germin family.
Family and domain databases
Sequence
- Sequence statusComplete
- Length178
- Mass (Da)18,801
- Last updated2020-10-07 v1
- Checksum4AEE8AE5FA86B2C2
Computationally mapped potential isoform sequences
There is 1 potential isoform mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
A0A6J1IQ43 | A0A6J1IQ43_CUCMA | LOC111477813 | 216 |
Keywords
- Technical term