A0A6J0JXT2 · A0A6J0JXT2_RAPSA

Function

function

Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).

GO annotations

AspectTerm
Cellular Componentnucleus
Molecular FunctionDNA binding
Biological Processauxin-activated signaling pathway
Biological Processregulation of DNA-templated transcription

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Auxin response factor

Gene names

    • Name
      LOC108812733

Organism names

Accessions

  • Primary accession
    A0A6J0JXT2

Proteomes

Subcellular Location

Keywords

  • Cellular component

Interaction

Subunit

Homodimers and heterodimers.

Family & Domains

Features

Showing features for domain, region, compositional bias.

TypeIDPosition(s)Description
Domain124-226TF-B3
Region358-404Disordered
Compositional bias368-383Pro residues
Region493-533Disordered
Compositional bias495-533Polar residues
Domain534-627PB1
Region630-657Disordered

Sequence similarities

Belongs to the ARF family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    657
  • Mass (Da)
    72,948
  • Last updated
    2020-10-07 v1
  • Checksum
    08DEAEEDD684B0F8
MAASNHPSGKPGGALSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGSEQKMPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLPEADQSEPMSPDAPVQEPEKCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKNQKLAVGMRFKMRFEGEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANNTPSAHLPPQRNKRPRPPGLPSPTTAPSTPDGVWKSPADNPSSVPLFSPPAKTAAFGHGGNKSFGVSIGSAFWPTHADGAAESFASALNNESPTTEKKQTSGNVCRLFGFELVENMNVDECFSAASVSGAVAVDQPPSNEFDSSQQSESLNINQASGDPEKSSLRSPQESQSRQIRSCTKVHMQGSAVGRAVDLTRSECYEDLFKKLEEMFDIKGELLQSTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLTVNVRMQSKTDADENGNAEGRSSSMAGSR

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias368-383Pro residues
Compositional bias495-533Polar residues

Keywords

Sequence databases

Genome annotation databases

Similar Proteins

Disclaimer

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