A0A6G1DZ49 · A0A6G1DZ49_9ORYZ

Function

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Molecular FunctionRNA binding
Biological ProcessmRNA 5'-splice site recognition

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    SURP motif domain-containing protein

Gene names

    • ORF names
      E2562_021470

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Menghai
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza meyeriana

Accessions

  • Primary accession
    A0A6G1DZ49

Proteomes

Family & Domains

Features

Showing features for region, compositional bias, domain.

TypeIDPosition(s)Description
Region93-114Disordered
Compositional bias95-114Polar residues
Domain160-202SURP motif
Domain360-402SURP motif
Compositional bias409-454Basic and acidic residues
Region409-476Disordered
Compositional bias455-470Polar residues
Region518-588Disordered
Compositional bias519-578Polar residues
Region636-855Disordered
Compositional bias679-732Basic and acidic residues
Compositional bias733-757Basic residues
Compositional bias758-772Basic and acidic residues
Compositional bias779-795Basic and acidic residues
Compositional bias803-819Basic and acidic residues
Compositional bias820-852Polar residues

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    867
  • Mass (Da)
    95,441
  • Last updated
    2020-08-12 v1
  • Checksum
    8654810A814DE830
MDLEIVGRHALLFDDDPTAEVVNSGGSLVPWAAVGADDLLLDRHDVRHLLDRVPPRPRRSYSAALLAAPSPDGVSEAELDRERFLDLTANDFGGEGSQDGVSSGNGTDTGQADYNAVPFSYGSTAGSDDPNKLSSYYCPSFPVPDRLLNKLPASEKVHQIIARTALFVSEHGGQSEIVLRVKQGSNPTFGFLMPDHHLHSYYRYLVDHPQLLKDGVDADSNNGCKASNSESEHAASSGGALSLLGAVYESGDEDEDMLPPGPKGTVPVKGVVAREQGHESSTSGICCNEEAGEGQKATAAAAVAVKDKSILTKKNPMITGSSIVAARREKVKDAMMASGISDVSDTKDVILEPPSFLKRTMEKIVEFILRNGKEFEGKLIEQDRTTGRFPFLLTSNPYHSYYVKLLKETQESKSRGGSSEPKDRRSSSEHTHRRSSTARKASSHGKEETRSKTQSSTSKDASYSDRSSAEPSEKQLYDKHKQEKGKFHMIISGAKKEPPRNVTADEAAAIVMAATRGLGPANTRTNTPKDTRCIGQTRGDNGHTSSFGSFSSLQDPDVLSKPVSKSEAGTSLTSSGRPKKEGTGIIDDDWIANTIAKAAAVAASKEADSSEASMTKEQKLKAERLRRAKMFASIIKSGGSKMADLSTSADPANEAEKASPADLNLSGSDPQLSAKEREGSSVPFEREGSNLAKQEKDSDDEQNRTRKYRKKHHPDSDEENYDSEESYKHSRKRHRSEHDVYIHKHKRHSKDLEHRHRRHHRSSSEDEHEHRSSKSRHRHRDYRYYEDDEHRSSHRHRDHRSSSKRKKDDDRDKSKQIQDRPEVSQSTSGHKFESEKAPGDTAQSSQATTEVPSELRAKIRAMLLETL

Computationally mapped potential isoform sequences

There are 2 potential isoforms mapped to this entry

View all
EntryEntry nameGene nameLength
A0A6G1DY34A0A6G1DY34_9ORYZE2562_021470675
A0A6G1DZY2A0A6G1DZY2_9ORYZE2562_021470774

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias95-114Polar residues
Compositional bias409-454Basic and acidic residues
Compositional bias455-470Polar residues
Compositional bias519-578Polar residues
Compositional bias679-732Basic and acidic residues
Compositional bias733-757Basic residues
Compositional bias758-772Basic and acidic residues
Compositional bias779-795Basic and acidic residues
Compositional bias803-819Basic and acidic residues
Compositional bias820-852Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
SPHZ02000005
EMBL· GenBank· DDBJ
KAF0917789.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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