A0A4V6D0W5 · A0A4V6D0W5_SETVI
- ProteinBHLH domain-containing protein
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids516 (go to sequence)
- Protein existenceInferred from homology
- Annotation score2/5
Function
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | nucleus | |
Molecular Function | DNA-binding transcription factor activity | |
Molecular Function | protein dimerization activity |
Keywords
- Biological process
Names & Taxonomy
Protein names
- Recommended nameBHLH domain-containing protein
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > PACMAD clade > Panicoideae > Panicodae > Paniceae > Cenchrinae > Setaria
Accessions
- Primary accessionA0A4V6D0W5
Proteomes
Genome annotation databases
Subcellular Location
UniProt Annotation
GO Annotation
Structure
Family & Domains
Features
Showing features for region, compositional bias, domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 40-68 | Disordered | ||||
Sequence: NNRKLPPRPEKAAAGAAAPAPAPAPQDDE | ||||||
Region | 143-166 | Disordered | ||||
Sequence: PPPKSTHVSGSRQQTMSLADSGDN | ||||||
Compositional bias | 148-164 | Polar residues | ||||
Sequence: THVSGSRQQTMSLADSG | ||||||
Compositional bias | 237-278 | Polar residues | ||||
Sequence: SAMGSANANASGRGNEATVASSSGRSNYCFGTTTTTEPTSTS | ||||||
Region | 237-306 | Disordered | ||||
Sequence: SAMGSANANASGRGNEATVASSSGRSNYCFGTTTTTEPTSTSNRSSKRKRLDTEDSESPSEDAESESAAM | ||||||
Domain | 322-371 | BHLH | ||||
Sequence: RAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSL | ||||||
Region | 495-516 | Disordered | ||||
Sequence: PAAAAAAPGVLPPESAPSRGPG |
Sequence similarities
Belongs to the bHLH protein family.
Family and domain databases
Sequence
- Sequence statusComplete
- Length516
- Mass (Da)53,494
- Last updated2019-07-31 v1
- Checksum5AFA2B61E917B772
Computationally mapped potential isoform sequences
There are 5 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
A0A4U6SUJ9 | A0A4U6SUJ9_SETVI | SEVIR_9G159000v2 | 528 | ||
A0A4U6SVB2 | A0A4U6SVB2_SETVI | SEVIR_9G159000v2 | 524 | ||
A0A4U6SUA1 | A0A4U6SUA1_SETVI | SEVIR_9G159000v2 | 522 | ||
A0A4U6T5Z8 | A0A4U6T5Z8_SETVI | SEVIR_9G159000v2 | 520 | ||
A0A4U6SW74 | A0A4U6SW74_SETVI | SEVIR_9G159000v2 | 526 |
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 148-164 | Polar residues | ||||
Sequence: THVSGSRQQTMSLADSG | ||||||
Compositional bias | 237-278 | Polar residues | ||||
Sequence: SAMGSANANASGRGNEATVASSSGRSNYCFGTTTTTEPTSTS |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
CM016560 EMBL· GenBank· DDBJ | TKV92355.1 EMBL· GenBank· DDBJ | Genomic DNA |