A0A3D5Z749 · A0A3D5Z749_UNCFI

Function

function

An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes.

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcytoplasm
Cellular Componentribosome
Molecular Functionribosome binding
Biological Processribosomal small subunit biogenesis
Biological ProcessrRNA processing

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Ribosome maturation factor RimM

Gene names

    • Name
      rimM
    • ORF names
      DHU33_03310

Organism names

Accessions

  • Primary accession
    A0A3D5Z749

Proteomes

Subcellular Location

Keywords

Interaction

Subunit

Binds ribosomal protein uS19.

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain6-85RimM N-terminal

Domain

The PRC barrel domain binds ribosomal protein uS19.

Sequence similarities

Belongs to the RimM family.

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    162
  • Mass (Da)
    18,977
  • Last updated
    2019-01-16 v1
  • Checksum
    2ADF4F4228593891
MNEYVCIGRIVNTHGIKGELRIKSDFELKNQVFKINNEIFIGKEHESHIITSYRIHKDYDMITLKGLNNINDVLKYKNMLVYVKRNILEIKDYILSDLIGLEVVENNTSYGIVKDYYDNNNHPILEVQGKTSFYIPTEGSYIKKVDLINKKLYTKDVRSLIL

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
DPQP01000005
EMBL· GenBank· DDBJ
HCY44439.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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