A0A2T6CC98 · A0A2T6CC98_9RHOB

  • Protein
    Ribosomal RNA large subunit methyltransferase J
  • Gene
    rlmJ
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    3/5

Function

function

Specifically methylates the adenine in position 2030 of 23S rRNA.

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Catalytic activity

Features

Showing features for site, binding site, active site.

125820406080100120140160180200220240
TypeIDPosition(s)Description
Site4Interaction with substrate rRNA
Binding site19S-adenosyl-L-methionine (UniProtKB | ChEBI)
Binding site42S-adenosyl-L-methionine (UniProtKB | ChEBI)
Binding site97S-adenosyl-L-methionine (UniProtKB | ChEBI)
Binding site115S-adenosyl-L-methionine (UniProtKB | ChEBI)
Binding site139-140S-adenosyl-L-methionine (UniProtKB | ChEBI)
Active site160Proton acceptor
Binding site160S-adenosyl-L-methionine (UniProtKB | ChEBI)

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcytosol
Molecular Function23S rRNA (adenine(2030)-N(6))-methyltransferase activity
Molecular FunctionRNA binding
Biological ProcessrRNA base methylation

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Ribosomal RNA large subunit methyltransferase J
  • EC number
  • Alternative names
    • 23S rRNA (adenine(2030)-N6)-methyltransferase
    • 23S rRNA m6A2030 methyltransferase

Gene names

    • Name
      rlmJ
    • ORF names
      C8N31_10844

Organism names

  • Taxonomic identifier
  • Strain
    • DSM 12244
  • Taxonomic lineage
    Bacteria > Pseudomonadota > Alphaproteobacteria > Rhodobacterales > Roseobacteraceae > Sulfitobacter

Accessions

  • Primary accession
    A0A2T6CC98

Proteomes

Subcellular Location

Interaction

Subunit

Monomer.

Family & Domains

Sequence similarities

Belongs to the RlmJ family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    258
  • Mass (Da)
    28,619
  • Last updated
    2018-07-18 v1
  • Checksum
    FDEC335832D4577D
MLSYQHIYHAGNLADVQKHALLAWMLSYLTRKDKPLTYMETHSGRALYDLTDDAALKTGEAAQGVEKVQGWFAADHPYSEVLAQTRGTHGPNAYPGSPMIAAQLLRAQDRIHLAELHPQEHSGLDLAMSPYPAKCYLQDGFEMAFALTPPTPRRGMLLIDPSYEIKTDYQDIPKQIGKLARAWNVGIIGLWYPILTNKAHLPMLQMLGQTHPDALRSEVRFPPARPGHGMVGSGLFVINPPYGLADEAKRLAALFAKL

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
QBKU01000008
EMBL· GenBank· DDBJ
PTX73136.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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