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Entry version 18 (31 Jul 2019)
Sequence version 1 (22 Jul 2015)
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Protein

O-phospho-L-seryl-tRNA:Cys-tRNA synthase

Gene

pscS

Organism
Methanosarcina mazei (Methanosarcina frisia)
Status
Unreviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Converts O-phospho-L-seryl-tRNA(Cys) (Sep-tRNA(Cys)) to L-cysteinyl-tRNA(Cys) (Cys-tRNA(Cys)).UniRule annotation

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.UniRule annotation

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

<p>This subsection of the ‘Function’ section provides information relevant to cofactors. A cofactor is any non-protein substance required for a protein to be catalytically active. Some cofactors are inorganic, such as the metal atoms zinc, iron, and copper in various oxidation states. Others, such as most vitamins, are organic.<p><a href='/help/cofactor' target='_top'>More...</a></p>Cofactori

pyridoxal 5'-phosphateUniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the interaction between a single amino acid and another chemical entity. Priority is given to the annotation of physiological ligands.<p><a href='/help/binding' target='_top'>More...</a></p>Binding sitei90Sulfur donor or Sep-tRNA(Cys)UniRule annotation1
Binding sitei114Sulfur donor or Sep-tRNA(Cys)UniRule annotation1
Binding sitei115Sulfur donor or Sep-tRNA(Cys)UniRule annotation1
Binding sitei196Pyridoxal phosphateUniRule annotation1
Binding sitei280Sulfur donor or Sep-tRNA(Cys)UniRule annotation1

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionLigaseImported, TransferaseUniRule annotation
Biological processProtein biosynthesisUniRule annotation
LigandPyridoxal phosphateUniRule annotation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
O-phospho-L-seryl-tRNA:Cys-tRNA synthaseUniRule annotation (EC:2.5.1.73UniRule annotation)
Alternative name(s):
Sep-tRNA:Cys-tRNA synthaseUniRule annotation
Short name:
SepCysSUniRule annotation
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:pscSImported
ORF Names:DKM28_07140Imported, DU30_09030Imported, DU31_09870Imported, DU33_17920Imported, DU34_00365Imported, DU35_15435Imported, DU36_14835Imported, DU37_18755Imported, DU38_13680Imported, DU39_13820Imported, DU40_02910Imported, DU41_17885Imported, DU42_02320Imported, DU43_14515Imported, DU44_19745Imported, DU45_17965Imported, DU46_09660Imported, DU47_15375Imported, DU48_16640Imported, DU49_14360Imported, DU50_10740Imported, DU51_12150Imported, DU52_09485Imported, DU54_10440Imported, DU55_11010Imported, DU56_09120Imported, DU57_03475Imported, DU58_06700Imported, DU59_15060Imported, DU60_14170Imported, DU61_07990Imported, DU62_09305Imported, DU63_08740Imported, DU64_17975Imported, DU65_07675Imported, DU66_08425Imported, DU67_09525Imported, DU68_16910Imported, DU69_05470Imported, DU71_11520Imported, DU72_06290Imported, DU73_05135Imported, DU74_12985Imported, DU75_10745Imported, DU76_07170Imported, DU77_12440Imported, DU78_11295Imported, DU79_18710Imported, DU80_02800Imported, DU81_09750Imported, DU82_08880Imported, DU83_18220Imported, DU84_10295Imported, DU85_17255Imported, DU86_11510Imported, DU87_08195Imported, DU88_06740Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMethanosarcina mazei (Methanosarcina frisia)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri2209 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiArchaeaEuryarchaeotaStenosarchaea groupMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanosarcina
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei222N6-(pyridoxal phosphate)lysineUniRule annotation1

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Homodimer.

Interacts with SepRS.

UniRule annotation

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni89 – 90Pyridoxal phosphate bindingUniRule annotation2
Regioni219 – 221Pyridoxal phosphate bindingUniRule annotation3

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the SepCysS family.UniRule annotation

Phylogenomic databases

Database of Orthologous Groups

More...
OrthoDBi
24071at2157

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.40.640.10, 1 hit
3.90.1150.10, 1 hit

HAMAP database of protein families

More...
HAMAPi
MF_01675 Sep_Cys_tRNA_synth, 1 hit

Integrated resource of protein families, domains and functional sites

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InterProi
View protein in InterPro
IPR015424 PyrdxlP-dep_Trfase
IPR015422 PyrdxlP-dep_Trfase_dom1
IPR015421 PyrdxlP-dep_Trfase_major
IPR013375 Sep_Cys-tRNA_synth_arc
IPR008829 SepSecS/SepCysS

The PANTHER Classification System

More...
PANTHERi
PTHR43586:SF3 PTHR43586:SF3, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF05889 SepSecS, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF53383 SSF53383, 1 hit

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR02539 SepCysS, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A0F8R0A6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTLDDSSLQK FGFIKRETLG SINIDPLQTG GLLTGAAKQA LVEWGDGYSV
60 70 80 90 100
CDFCGGVLDL VKKPPIHDFV HKALPEFLGC DEARVTNGAR ESKFAVMHSM
110 120 130 140 150
GKPGDWVVLD GLAHYSSYVA AERAGLNIEV VPHAGSPEYH LDPEGYGKAI
160 170 180 190 200
EEVTKENGKP PVLALVTYPD GSYGNIPDAA KIASVCHEYD VPLLLNGAYS
210 220 230 240 250
VGRMPVSAKE IGADFIVGSG HKSMAASGPV GVLGVSEEYA PVVFRKSVHN
260 270 280 290 300
KVKEIELLGC TARGATVMTL MASFPEVVKR TRNWDQEVEN ARWFSSRLEG
310 320 330 340 350
MGFIQRGQKP HSHDLMFFEA PGFYEISQKV KNGRYFLYRE LKERNIHGIK
360 370 380
SGLTKYFKLS TFGLGKEKLG TVADAFEDIL KKYENI
Length:386
Mass (Da):42,297
Last modified:July 22, 2015 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iAD138D1894E762E3
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
JJOT01000109 Genomic DNA Translation: KKF99385.1
JJOR01000109 Genomic DNA Translation: KKG02618.1
JJOS01000035 Genomic DNA Translation: KKG04355.1
JJOU01000122 Genomic DNA Translation: KKG13319.1
JJPC01000164 Genomic DNA Translation: KKG29956.1
JJPB01000037 Genomic DNA Translation: KKG33708.1
JJPA01000067 Genomic DNA Translation: KKG35597.1
JJPD01000180 Genomic DNA Translation: KKG37321.1
JJPF01000127 Genomic DNA Translation: KKG39880.1
JJPE01000003 Genomic DNA Translation: KKG48714.1
JJPI01000125 Genomic DNA Translation: KKG51247.1
JJPG01000060 Genomic DNA Translation: KKG53019.1
JJPH01000020 Genomic DNA Translation: KKG55443.1
JJPJ01000157 Genomic DNA Translation: KKG57084.1
JJPK01000009 Genomic DNA Translation: KKG65616.1
JJPL01000057 Genomic DNA Translation: KKG66225.1
JJPO01000135 Genomic DNA Translation: KKG70409.1
JJPN01000023 Genomic DNA Translation: KKG74749.1
JJPM01000109 Genomic DNA Translation: KKG76863.1
JJPP01000038 Genomic DNA Translation: KKG81809.1
JJPQ01000061 Genomic DNA Translation: KKG83103.1
JJPS01000185 Genomic DNA Translation: KKG86815.1
JJPR01000074 Genomic DNA Translation: KKG87164.1
JJPT01000038 Genomic DNA Translation: KKG93575.1
JJPU01000079 Genomic DNA Translation: KKG98134.1
JJPV01000050 Genomic DNA Translation: KKH01016.1
JJPW01000010 Genomic DNA Translation: KKH03709.1
JJPX01000156 Genomic DNA Translation: KKH05952.1
JJPY01000041 Genomic DNA Translation: KKH10253.1
JJPZ01000071 Genomic DNA Translation: KKH11299.1
JJQA01000106 Genomic DNA Translation: KKH14087.1
JJQB01000079 Genomic DNA Translation: KKH19633.1
JJQC01000020 Genomic DNA Translation: KKH24716.1
JJQE01000112 Genomic DNA Translation: KKH27083.1
JJQD01000116 Genomic DNA Translation: KKH27404.1
JJQF01000127 Genomic DNA Translation: KKH27624.1
JJQG01000168 Genomic DNA Translation: KKH33847.1
JJQI01000118 Genomic DNA Translation: KKH35634.1
JJQH01000075 Genomic DNA Translation: KKH41391.1
JJQJ01000173 Genomic DNA Translation: KKH45767.1
JJQM01000166 Genomic DNA Translation: KKH51451.1
JJQK01000045 Genomic DNA Translation: KKH54911.1
JJQO01000287 Genomic DNA Translation: KKH60779.1
JJQN01000042 Genomic DNA Translation: KKH61723.1
JJQP01000268 Genomic DNA Translation: KKH62132.1
JJQQ01000144 Genomic DNA Translation: KKH64683.1
JJQR01000160 Genomic DNA Translation: KKH71125.1
JJQS01000117 Genomic DNA Translation: KKH72567.1
JJQT01000126 Genomic DNA Translation: KKH78243.1
JJQV01000008 Genomic DNA Translation: KKH86515.1
JJQU01000050 Genomic DNA Translation: KKH89105.1
JJQW01000026 Genomic DNA Translation: KKH90297.1
JJQX01000175 Genomic DNA Translation: KKH91800.1
JJQZ01000024 Genomic DNA Translation: KKH99017.1
JJRA01000117 Genomic DNA Translation: KKI01822.1
JJRB01000023 Genomic DNA Translation: KKI05815.1
CP029709 Genomic DNA Translation: QCR15847.1

NCBI Reference Sequences

More...
RefSeqi
WP_048037348.1, NZ_JJRB01000023.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
KKF99385; KKF99385; DU40_02910
KKG02618; KKG02618; DU31_09870
KKG04355; KKG04355; DU47_15375
KKG13319; KKG13319; DU34_00365
KKG29956; KKG29956; DU30_09030
KKG33708; KKG33708; DU49_14360
KKG35597; KKG35597; DU52_09485
KKG37321; KKG37321; DU35_15435
KKG39880; KKG39880; DU39_13820
KKG48714; KKG48714; DU41_17885
KKG51247; KKG51247; DU33_17920
KKG53019; KKG53019; DU38_13680
KKG55443; KKG55443; DU36_14835
KKG57084; KKG57084; DU64_17975
KKG65616; KKG65616; DU45_17965
KKG66225; KKG66225; DU67_09525
KKG70409; KKG70409; DU63_08740
KKG74749; KKG74749; DU46_09660
KKG76863; KKG76863; DU43_14515
KKG81809; KKG81809; DU55_11010
KKG83103; KKG83103; DU61_07990
KKG86815; KKG86815; DU59_15060
KKG87164; KKG87164; DU57_03475
KKG93575; KKG93575; DU69_05470
KKG98134; KKG98134; DU66_08425
KKH01016; KKH01016; DU68_16910
KKH03709; KKH03709; DU56_09120
KKH05952; KKH05952; DU42_02320
KKH10253; KKH10253; DU51_12150
KKH11299; KKH11299; DU62_09305
KKH14087; KKH14087; DU44_19745
KKH19633; KKH19633; DU48_16640
KKH24716; KKH24716; DU65_07675
KKH27083; KKH27083; DU60_14170
KKH27404; KKH27404; DU58_06700
KKH27624; KKH27624; DU37_18755
KKH33847; KKH33847; DU54_10440
KKH35634; KKH35634; DU71_11520
KKH41391; KKH41391; DU50_10740
KKH45767; KKH45767; DU85_17255
KKH51451; KKH51451; DU76_07170
KKH54911; KKH54911; DU72_06290
KKH60779; KKH60779; DU75_10745
KKH61723; KKH61723; DU74_12985
KKH62132; KKH62132; DU73_05135
KKH64683; KKH64683; DU87_08195
KKH71125; KKH71125; DU86_11510
KKH72567; KKH72567; DU77_12440
KKH78243; KKH78243; DU78_11295
KKH86515; KKH86515; DU82_08880
KKH89105; KKH89105; DU80_02800
KKH90297; KKH90297; DU88_06740
KKH91800; KKH91800; DU79_18710
KKH99017; KKH99017; DU84_10295
KKI01822; KKI01822; DU81_09750
KKI05815; KKI05815; DU83_18220

Database of genes from NCBI RefSeq genomes

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GeneIDi
24881568

Pathosystems Resource Integration Center (PATRIC)

More...
PATRICi
fig|2209.39.peg.3018

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JJOT01000109 Genomic DNA Translation: KKF99385.1
JJOR01000109 Genomic DNA Translation: KKG02618.1
JJOS01000035 Genomic DNA Translation: KKG04355.1
JJOU01000122 Genomic DNA Translation: KKG13319.1
JJPC01000164 Genomic DNA Translation: KKG29956.1
JJPB01000037 Genomic DNA Translation: KKG33708.1
JJPA01000067 Genomic DNA Translation: KKG35597.1
JJPD01000180 Genomic DNA Translation: KKG37321.1
JJPF01000127 Genomic DNA Translation: KKG39880.1
JJPE01000003 Genomic DNA Translation: KKG48714.1
JJPI01000125 Genomic DNA Translation: KKG51247.1
JJPG01000060 Genomic DNA Translation: KKG53019.1
JJPH01000020 Genomic DNA Translation: KKG55443.1
JJPJ01000157 Genomic DNA Translation: KKG57084.1
JJPK01000009 Genomic DNA Translation: KKG65616.1
JJPL01000057 Genomic DNA Translation: KKG66225.1
JJPO01000135 Genomic DNA Translation: KKG70409.1
JJPN01000023 Genomic DNA Translation: KKG74749.1
JJPM01000109 Genomic DNA Translation: KKG76863.1
JJPP01000038 Genomic DNA Translation: KKG81809.1
JJPQ01000061 Genomic DNA Translation: KKG83103.1
JJPS01000185 Genomic DNA Translation: KKG86815.1
JJPR01000074 Genomic DNA Translation: KKG87164.1
JJPT01000038 Genomic DNA Translation: KKG93575.1
JJPU01000079 Genomic DNA Translation: KKG98134.1
JJPV01000050 Genomic DNA Translation: KKH01016.1
JJPW01000010 Genomic DNA Translation: KKH03709.1
JJPX01000156 Genomic DNA Translation: KKH05952.1
JJPY01000041 Genomic DNA Translation: KKH10253.1
JJPZ01000071 Genomic DNA Translation: KKH11299.1
JJQA01000106 Genomic DNA Translation: KKH14087.1
JJQB01000079 Genomic DNA Translation: KKH19633.1
JJQC01000020 Genomic DNA Translation: KKH24716.1
JJQE01000112 Genomic DNA Translation: KKH27083.1
JJQD01000116 Genomic DNA Translation: KKH27404.1
JJQF01000127 Genomic DNA Translation: KKH27624.1
JJQG01000168 Genomic DNA Translation: KKH33847.1
JJQI01000118 Genomic DNA Translation: KKH35634.1
JJQH01000075 Genomic DNA Translation: KKH41391.1
JJQJ01000173 Genomic DNA Translation: KKH45767.1
JJQM01000166 Genomic DNA Translation: KKH51451.1
JJQK01000045 Genomic DNA Translation: KKH54911.1
JJQO01000287 Genomic DNA Translation: KKH60779.1
JJQN01000042 Genomic DNA Translation: KKH61723.1
JJQP01000268 Genomic DNA Translation: KKH62132.1
JJQQ01000144 Genomic DNA Translation: KKH64683.1
JJQR01000160 Genomic DNA Translation: KKH71125.1
JJQS01000117 Genomic DNA Translation: KKH72567.1
JJQT01000126 Genomic DNA Translation: KKH78243.1
JJQV01000008 Genomic DNA Translation: KKH86515.1
JJQU01000050 Genomic DNA Translation: KKH89105.1
JJQW01000026 Genomic DNA Translation: KKH90297.1
JJQX01000175 Genomic DNA Translation: KKH91800.1
JJQZ01000024 Genomic DNA Translation: KKH99017.1
JJRA01000117 Genomic DNA Translation: KKI01822.1
JJRB01000023 Genomic DNA Translation: KKI05815.1
CP029709 Genomic DNA Translation: QCR15847.1
RefSeqiWP_048037348.1, NZ_JJRB01000023.1

3D structure databases

Database of comparative protein structure models

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ModBasei
Search...

SWISS-MODEL Interactive Workspace

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SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblBacteriaiKKF99385; KKF99385; DU40_02910
KKG02618; KKG02618; DU31_09870
KKG04355; KKG04355; DU47_15375
KKG13319; KKG13319; DU34_00365
KKG29956; KKG29956; DU30_09030
KKG33708; KKG33708; DU49_14360
KKG35597; KKG35597; DU52_09485
KKG37321; KKG37321; DU35_15435
KKG39880; KKG39880; DU39_13820
KKG48714; KKG48714; DU41_17885
KKG51247; KKG51247; DU33_17920
KKG53019; KKG53019; DU38_13680
KKG55443; KKG55443; DU36_14835
KKG57084; KKG57084; DU64_17975
KKG65616; KKG65616; DU45_17965
KKG66225; KKG66225; DU67_09525
KKG70409; KKG70409; DU63_08740
KKG74749; KKG74749; DU46_09660
KKG76863; KKG76863; DU43_14515
KKG81809; KKG81809; DU55_11010
KKG83103; KKG83103; DU61_07990
KKG86815; KKG86815; DU59_15060
KKG87164; KKG87164; DU57_03475
KKG93575; KKG93575; DU69_05470
KKG98134; KKG98134; DU66_08425
KKH01016; KKH01016; DU68_16910
KKH03709; KKH03709; DU56_09120
KKH05952; KKH05952; DU42_02320
KKH10253; KKH10253; DU51_12150
KKH11299; KKH11299; DU62_09305
KKH14087; KKH14087; DU44_19745
KKH19633; KKH19633; DU48_16640
KKH24716; KKH24716; DU65_07675
KKH27083; KKH27083; DU60_14170
KKH27404; KKH27404; DU58_06700
KKH27624; KKH27624; DU37_18755
KKH33847; KKH33847; DU54_10440
KKH35634; KKH35634; DU71_11520
KKH41391; KKH41391; DU50_10740
KKH45767; KKH45767; DU85_17255
KKH51451; KKH51451; DU76_07170
KKH54911; KKH54911; DU72_06290
KKH60779; KKH60779; DU75_10745
KKH61723; KKH61723; DU74_12985
KKH62132; KKH62132; DU73_05135
KKH64683; KKH64683; DU87_08195
KKH71125; KKH71125; DU86_11510
KKH72567; KKH72567; DU77_12440
KKH78243; KKH78243; DU78_11295
KKH86515; KKH86515; DU82_08880
KKH89105; KKH89105; DU80_02800
KKH90297; KKH90297; DU88_06740
KKH91800; KKH91800; DU79_18710
KKH99017; KKH99017; DU84_10295
KKI01822; KKI01822; DU81_09750
KKI05815; KKI05815; DU83_18220
GeneIDi24881568
PATRICifig|2209.39.peg.3018

Phylogenomic databases

OrthoDBi24071at2157

Family and domain databases

Gene3Di3.40.640.10, 1 hit
3.90.1150.10, 1 hit
HAMAPiMF_01675 Sep_Cys_tRNA_synth, 1 hit
InterProiView protein in InterPro
IPR015424 PyrdxlP-dep_Trfase
IPR015422 PyrdxlP-dep_Trfase_dom1
IPR015421 PyrdxlP-dep_Trfase_major
IPR013375 Sep_Cys-tRNA_synth_arc
IPR008829 SepSecS/SepCysS
PANTHERiPTHR43586:SF3 PTHR43586:SF3, 1 hit
PfamiView protein in Pfam
PF05889 SepSecS, 1 hit
SUPFAMiSSF53383 SSF53383, 1 hit
TIGRFAMsiTIGR02539 SepCysS, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A0F8R0A6_METMZ
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A0F8R0A6
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: July 22, 2015
Last sequence update: July 22, 2015
Last modified: July 31, 2019
This is version 18 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
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