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Entry version 57 (17 Jun 2020)
Sequence version 1 (09 Jul 2014)
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Protein
Submitted name:

IS3 family transposase

Gene

AYJ03_010990

Organism
Mycobacterium tuberculosis
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
IS3 family transposaseImported
Submitted name:
TransposaseImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:AYJ03_010990Imported, DSI38_16315Imported, E5M05_16255Imported, ERS007663_02862Imported, ERS007681_03374Imported, ERS007703_01870Imported, ERS007720_02366Imported, ERS013471_03701Imported, ERS023446_02655Imported, ERS024276_03125Imported, ERS027646_01321Imported, ERS027659_01637Imported, ERS027661_01828Imported, ERS075361_03139Imported, ERS094182_01890Imported, F6W99_00678Imported, GJE03_10955Imported, SAMEA2683035_00432Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMycobacterium tuberculosisImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri1773 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacteriumMycobacterium tuberculosis complex
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000048948 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence
  • UP000256245 Componenti: Unassembled WGS sequence
  • UP000049989 Componenti: Unassembled WGS sequence
  • UP000049023 Componenti: Unassembled WGS sequence
  • UP000047893 Componenti: Unassembled WGS sequence
  • UP000039953 Componenti: Unassembled WGS sequence
  • UP000182946 Componenti: Unassembled WGS sequence
  • UP000075723 Componenti: Chromosome
  • UP000048289 Componenti: Unassembled WGS sequence
  • UP000038802 Componenti: Unassembled WGS sequence
  • UP000042440 Componenti: Unassembled WGS sequence
  • UP000326088 Componenti: Chromosome
  • UP000298175 Componenti: Unassembled WGS sequence
  • UP000046213 Componenti: Unassembled WGS sequence
  • UP000388593 Componenti: Chromosome
  • UP000040993 Componenti: Unassembled WGS sequence
  • UP000044938 Componenti: Unassembled WGS sequence
  • UP000050164 Componenti: Unassembled WGS sequence

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini79 – 113HTH_21InterPro annotationAdd BLAST35

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni121 – 141DisorderedSequence analysisAdd BLAST21

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR025948 HTH-like_dom

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF13276 HTH_21, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A045GVS7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRPATPLICA FGDKHKHTYG VTPICRALAV HGVQIASRTY FADRAAAPSK
60 70 80 90 100
RALWDTTITE ILAGYYEPDA EGKRPPECLY GSLKMWAHLQ RQGFRWPSAT
110 120 130 140 150
VKTIMRANGW RGVPLAAHIT HHRTRPGRGP GPRPGGSAMA GFSNEPAGSG
160 170 180 190 200
RLHLRADDVE FRLHRVRGRR LRRCDRGLGM LADQRRSVRR TRITPRPSRL

T
Length:201
Mass (Da):22,518
Last modified:July 9, 2014 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i22AEC2268708FE5B
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CFOE01000573 Genomic DNA Translation: CFE43272.1
CNCN01001002 Genomic DNA Translation: CKP62815.1
CNFT01000319 Genomic DNA Translation: CKR52853.1
CNFU01000338 Genomic DNA Translation: CKR65066.1
CNGE01000185 Genomic DNA Translation: CKS13262.1
CQAC01000027 Genomic DNA Translation: CNH06215.1
CQGE01000064 Genomic DNA Translation: CNN24538.1
CQPV01000491 Genomic DNA Translation: CNV30816.1
CQTT01000165 Genomic DNA Translation: CNZ16518.1
CSAE01000177 Genomic DNA Translation: COV68953.1
CSAJ01000299 Genomic DNA Translation: COW32953.1
CVKR01000012 Genomic DNA Translation: CRF26451.1
CP044345 Genomic DNA Translation: QEX89904.1
CP045962 Genomic DNA Translation: QGK79287.1
CP046529 Genomic DNA Translation: QGV21741.1
QSXJ01001032 Genomic DNA Translation: REM64195.1
FPTZ01000002 Genomic DNA Translation: SGH14797.1
SRLI01000037 Genomic DNA Translation: TGD99941.1

NCBI Reference Sequences

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RefSeqi
WP_003899164.1, NZ_WJSJ01000028.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
AMC46506; AMC46506; RN05_2230
CFE43272; CFE43272; ERS007681_03374
CKP62815; CKP62815; ERS024276_03125
CKQ11676; CKQ11676; ERS024213_03258
CKR52853; CKR52853; ERS027659_01637
CKR65066; CKR65066; ERS027661_01828
CKS13262; CKS13262; ERS027646_01321
CKV39373; CKV39373; ERS031537_02664
CNG59451; CNG59451; ERS124361_01328
CNN24538; CNN24538; ERS023446_02655
CNV30816; CNV30816; ERS007663_02862
CNZ16518; CNZ16518; ERS013471_03701
COV53455; COV53455; ERS007672_01991
COV68953; COV68953; ERS007703_01870
COW32953; COW32953; ERS007720_02366
COW51667; COW51667; ERS007726_00893
CRH10095; CRH10095; BN1303_00487
CRH10820; CRH10820; BN1213_00907

Pathosystems Resource Integration Center (PATRIC)

More...
PATRICi
fig|1773.206.peg.1076

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CFOE01000573 Genomic DNA Translation: CFE43272.1
CNCN01001002 Genomic DNA Translation: CKP62815.1
CNFT01000319 Genomic DNA Translation: CKR52853.1
CNFU01000338 Genomic DNA Translation: CKR65066.1
CNGE01000185 Genomic DNA Translation: CKS13262.1
CQAC01000027 Genomic DNA Translation: CNH06215.1
CQGE01000064 Genomic DNA Translation: CNN24538.1
CQPV01000491 Genomic DNA Translation: CNV30816.1
CQTT01000165 Genomic DNA Translation: CNZ16518.1
CSAE01000177 Genomic DNA Translation: COV68953.1
CSAJ01000299 Genomic DNA Translation: COW32953.1
CVKR01000012 Genomic DNA Translation: CRF26451.1
CP044345 Genomic DNA Translation: QEX89904.1
CP045962 Genomic DNA Translation: QGK79287.1
CP046529 Genomic DNA Translation: QGV21741.1
QSXJ01001032 Genomic DNA Translation: REM64195.1
FPTZ01000002 Genomic DNA Translation: SGH14797.1
SRLI01000037 Genomic DNA Translation: TGD99941.1
RefSeqiWP_003899164.1, NZ_WJSJ01000028.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblBacteriaiAMC46506; AMC46506; RN05_2230
CFE43272; CFE43272; ERS007681_03374
CKP62815; CKP62815; ERS024276_03125
CKQ11676; CKQ11676; ERS024213_03258
CKR52853; CKR52853; ERS027659_01637
CKR65066; CKR65066; ERS027661_01828
CKS13262; CKS13262; ERS027646_01321
CKV39373; CKV39373; ERS031537_02664
CNG59451; CNG59451; ERS124361_01328
CNN24538; CNN24538; ERS023446_02655
CNV30816; CNV30816; ERS007663_02862
CNZ16518; CNZ16518; ERS013471_03701
COV53455; COV53455; ERS007672_01991
COV68953; COV68953; ERS007703_01870
COW32953; COW32953; ERS007720_02366
COW51667; COW51667; ERS007726_00893
CRH10095; CRH10095; BN1303_00487
CRH10820; CRH10820; BN1213_00907
PATRICifig|1773.206.peg.1076

Family and domain databases

InterProiView protein in InterPro
IPR025948 HTH-like_dom
PfamiView protein in Pfam
PF13276 HTH_21, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A045GVS7_MYCTX
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A045GVS7
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: July 9, 2014
Last sequence update: July 9, 2014
Last modified: June 17, 2020
This is version 57 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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