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Proteomes · Solanum lycopersicum (Tomato) (Lycopersicon esculentum)

Description

Solanum lycopersicum (tomato) is the second most important vegetable crop after the closely related potato (Solanum tuberosum) and is cultivated in over 140 different countries. The species originated in South America, where a number of wild relatives can be found. It is a perennial, though as a crop plant is often grown as an annual. Solanum lycopersicum is particularly studied as a model organism for fruit development. The tomato reference proteome is derived from the genome for the inbred cultivar Heinz 1706, which was sequenced by the Tomato Genome Consortium and published in 2012. The tomato genome has a haploid chromosome number of 12, containing 900 Mb and 35,000 protein-coding genes.

Components

Component nameGenome accession(s)Protein count
Chromosome 1CM0010644,220
Chromosome 2CM0010653,399
Chromosome 3CM0010663,335
Chromosome 4CM0010672,726
Chromosome 5CM0010682,506
Chromosome 6CM0010692,793
Chromosome 7CM0010702,474
Chromosome 8CM0010712,436
Chromosome 9CM0010722,473
Chromosome 10CM0010732,534
Chromosome 11CM0010742,304
Chromosome 12CM0010752,420
ChloroplastAM08720080
Unassembled WGS sequenceAEKE03000000728
UnplacedSOLLC_unplc255

Publications

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