A0A9D2DCJ5 · A0A9D2DCJ5_9BACT

Function

function

Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template.

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.
The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Features

Showing features for binding site.

154550100150200250300350400450500
TypeIDPosition(s)Description
Binding site296-301ATP (UniProtKB | ChEBI)
Binding site308-313ATP (UniProtKB | ChEBI)
Binding site339ATP (UniProtKB | ChEBI)

GO annotations

AspectTerm
Molecular FunctionATP binding
Molecular FunctionATP hydrolysis activity
Molecular FunctionATP-dependent activity, acting on RNA
Molecular Functionhelicase activity
Molecular FunctionRNA binding
Biological ProcessDNA-templated transcription termination

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Transcription termination factor Rho
  • EC number
  • Alternative names
    • ATP-dependent helicase Rho

Gene names

    • Name
      rho
    • ORF names
      H9816_01005

Organism names

Accessions

  • Primary accession
    A0A9D2DCJ5

Proteomes

Interaction

Subunit

Homohexamer. The homohexamer assembles into an open ring structure.

Family & Domains

Features

Showing features for region, compositional bias, domain.

Type
IDPosition(s)Description
Region38-174Disordered
Compositional bias49-59Basic and acidic residues
Compositional bias87-96Basic residues
Domain177-252Rho RNA-BD

Sequence similarities

Belongs to the Rho family.

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    545
  • Mass (Da)
    60,221
  • Last updated
    2023-05-03 v1
  • MD5 Checksum
    BFDD3E975A2BD298BA4108895BC13056
MQDLDALQQKSILQLREIAKAMGVKSVTTMKKDDLIRAIAGNGTPSRPSADEAPRREDTAAATDSKTTDTAPDAPRPEAAPAEANRPRRGRPRKNATPHAAPEAETPRPEATDEEAAAPVAEGQTATQPQQPAPRPEQPRQQRPFRQQHHRPQHGGSEAARPADRYTPTPADASIGYVEGEGVLEIMPDGYGFLRSPDYNYLNSPDDIYVAAAQIKTYGLKPGDTVRGVIRPPKEGEKYFPLVKPVEINGLAPEFIRDRVQFEYMTPLFPNEKFTLTGNGHNNMSTRIVDLFAPIGKGQRGLIVAQPKTGKTVLLQNIANAIADNHPEVYMIVLLIDERPEEVTEMARNVKAEVVASTFDEQASRHVKVAEMVLDKAKRMVECGHDVVIFLDSITRLARAYNTVQPASGKVLSGGVDANALHKPKRFFGAARNTEERGSLTIIATALIDTGSKMDEVIFEEFKGTGNMELQLDRKLANKRIYPAVDVVASGTRREDLLLSKEVLQKTWILRRYLSDMTSVEAMEEMAKHMEHTQDNEELLATMNK

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias49-59Basic and acidic residues
Compositional bias87-96Basic residues

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
DXCC01000004
EMBL· GenBank· DDBJ
HIZ14482.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
This website requires cookies, and the limited processing of your personal data in order to function. By using the site you are agreeing to this as outlined in our Privacy Notice.
Help