A0A9D2DCJ5 · A0A9D2DCJ5_9BACT
- ProteinTranscription termination factor Rho
- Generho
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids545 (go to sequence)
- Protein existenceInferred from homology
- Annotation score3/5
Function
function
Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template.
Features
Showing features for binding site.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Binding site | 296-301 | ATP (UniProtKB | ChEBI) | |||
Binding site | 308-313 | ATP (UniProtKB | ChEBI) | |||
Binding site | 339 | ATP (UniProtKB | ChEBI) | |||
GO annotations
Aspect | Term | |
---|---|---|
Molecular Function | ATP binding | |
Molecular Function | ATP hydrolysis activity | |
Molecular Function | ATP-dependent activity, acting on RNA | |
Molecular Function | helicase activity | |
Molecular Function | RNA binding | |
Biological Process | DNA-templated transcription termination |
Keywords
- Molecular function
- Biological process
- Ligand
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameTranscription termination factor Rho
- EC number
- Alternative names
Gene names
Organism names
- Strain
- Taxonomic lineageBacteria > Bacteroidota > Bacteroidia > Bacteroidales > Rikenellaceae > Tidjanibacter
Accessions
- Primary accessionA0A9D2DCJ5
Proteomes
Interaction
Subunit
Homohexamer. The homohexamer assembles into an open ring structure.
Structure
Family & Domains
Features
Showing features for region, compositional bias, domain.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Region | 38-174 | Disordered | |||
Compositional bias | 49-59 | Basic and acidic residues | |||
Compositional bias | 87-96 | Basic residues | |||
Domain | 177-252 | Rho RNA-BD | |||
Sequence similarities
Belongs to the Rho family.
Family and domain databases
Sequence
- Sequence statusComplete
- Length545
- Mass (Da)60,221
- Last updated2023-05-03 v1
- MD5 ChecksumBFDD3E975A2BD298BA4108895BC13056
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Compositional bias | 49-59 | Basic and acidic residues | |||
Compositional bias | 87-96 | Basic residues | |||
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
DXCC01000004 EMBL· GenBank· DDBJ | HIZ14482.1 EMBL· GenBank· DDBJ | Genomic DNA |